Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30375g00005 ATGATGGATTGGTTTTCAATTCCATTAGATCTGAATTCCATATACGAGGAACCTCAATTGGAAGAGCAAATCGAGGATCTGAATTCCGTTGATGAGATTGGGCAATTGGATGATCATTTTGAGTTTATGTGTAATGTTGATGAAGAGTATGTCCCCAAGGTTGGGATGACATTTAAATCATGTACAGAAGCCAGTGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTTCTTCCAAAATCCGAAATTCGCAGAGGAATAAAGAGACCGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAGAGTGA 312 0.3878 MMDWFSIPLDLNSIYEEPQLEEQIEDLNSVDEIGQLDDHFEFMCNVDEEYVPKVGMTFKSCTEASEFYKEYAKRAGFSSKIRNSQRNKETGAIKNQLFTCKRE 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30375g00005 103 Pfam FAR1 DNA-binding domain 66 103 IPR004330 -
Stsc30375g00005 103 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30375g00005 Stsc-Chr30375 55568 56258 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30375g00005 FAR1 5.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30375g00005 - K17604 aip:107614666 77.4109