Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30374g00008 ATGGGTGTGGTGGAGTCTATTGGGGAGTTTGGTTCACAGAACGTGAATGCAGGGGAAGAGGTGAAGGATGACGACGCTGAACCAATGGGTGGTGGTGCCAGAGAAAGAGAGTCAGGCGATAGCGGGGTTATGGAAGGAATGATGCCAGAGGAAATTTTGAAAAGGGTATTCACGAAAGATGAAGAAGCATATGAGGCCTACAAGGAGTTTGGGAAGTACCATGGATTTGGTGTAAGAAAGGGCGACTGCAAGAGGGACGAATTTGGCAATGTTACTAGTCGGAGATTCTTTTGCAACCGAGAAGGTTTAAGAGAGGCAAAGTACTACAATCGAGTGGATAGGGTTAGGGCGCACAAAGCTGAAACAAGGACAAATTGTCAGGCTAAGTTCTCAATATTTCTAGACAAGACTGAATCAGTTTGGCGCATGAGGAAAATTGACAACAACCACAACCATGAGCTTACTCCACACGGAATGGTGCACCTAATTCCAAAATATCGGTCAATGACAGTTGCTGCAAAGGATCAAATAAATGGTCTAAACCAGTGTGGGATCTCTACCGCGAAGGCAGTTCGATACATGGCTGGGATGGCCGGTGGGTATCCATTGGTTGGGTTTCTAAAGAAGGATGCATACAATTATGTTGACAAGAAAAGGCGTGAAAGCATAGCCGATGGAGATGCGGAGGCAGCAATTGCGTACTTGGAGGGAAAGACGGAAGCAGATCCAATGGCGATGGCAGTGTACAACATGACAGAGGATGGGATGCTGGGAAATTTATTCTGGGCTGATGGCCGCAGCAGATTGGATTACCAATACTTTGGCGACGTCCTTGCGTTCGATTCAACTTACAAGAAGAACAAGTATAATAGGCCGTTGGTTATTTTCTCAGGAGCGAACAATCACAAACAGACTACAATATTTGGTTTTGGAGTGGTGATGGATGAGACTATTGCGTCATACACGTGGTTGTTGGAGAAACTGCTTGAGGTAATGTGTGGCAGGCAGCCTTCTGTGGTTGTAACAGATGGTGACGAGTCGATGCGCAAAGCTATATGTGAAGTTTTTCCATCAGCTACCCATAGGCTATGTGCTTGGCACTTTGAGAAGAACGTAACCTCGAACGTGAAAGAAGTAGCGCTGAGGGAGCGATTTAATAGATGCTTATTTTGGGACATGACAGTTGATGAGTTTCTTATGGAATGGAGCAACACGGTTGAGGAGTTTGGTTTGGAGGAAAGTTTGTGGGCAAATCAAGTATTTTACAAGAAGGAGATGTGGGTGAATGCTTATCTACGCGAGAAGTTTTGTGCATGTATTAGGACGACGTCACGGTGCGAGGGTGTAAATGCAATAGCAAAGAACTTTCTCCAATCAAAGGGAACATTACTTGAGCTTGTGCAGAACCTTGAGTTGATGGTGAAAGATTATAGTAACAACGAGTTGTTGGCCCAATTTAGAACCATAGATGGTATACCGGTGATGACTACTAGCTTGGAATCGTTAGAACGTGATGCTGCAGAAACCTACACAAAGGCAGTCTTTGGCGATGTTCGGCTAGAGATAGAGAGGGTTGCTGTAGTAAACTTGGTGAGATTAGGTAGGTCCTTGACAACAAAGATTTACACACTCGAAGACTATGGATTTAGCGGGAGAAATGTCATTGTTCTTTTTGACATAAACATGGGGATGATGAAGTGTTCGTGCGGTCGTTGGTGCAAAAATGGCTACCCTTGTCGACATATGTTTTTTGTCATGAAGTCAGAACATCTCAAACAAATTCCTCGGCATCTAATTCTCAAGCGATGGACCAGAGATGCAAAGTCATTGGATGAATACGTAGAGAAAACAAAAGACAATGGTGATAGGTCATTTCTGTTGTGTCATGGCGCCCTGCACACCGCCTCTCAATGGCTATTTTTCTTGGGGGCACAAAAGTTTCACTTGTACGAGAAGGCAATGAAGACAATCCGTGAGTTGTGTGCTGAACTTGAGAGAGAATGTGCACATGGCCAAGGAGGAACTCCTCTAAATCCAAGAGGAGTGGTTCGTGATCCGAATGTAGCTAAGACTAAAGGGGCTCCTAAGTATTCTAAACGAATCCATAATAAGAGGCTTTGTACCGAATGCAAGAATACCGGCCATAACAAGAGGAAGTGCCCGGATGTCAAAAGGATTCCGAAGAAGAAGGTGCTGTATGATGGAGCTTTCGAATATGATGAGTTGGAAGAGGCTGAAATGCTGTGGTCGAAGTACGAATTTGAAGGTTATTATTACCTTCAATTTTGA 2289 0.4443 MGVVESIGEFGSQNVNAGEEVKDDDAEPMGGGARERESGDSGVMEGMMPEEILKRVFTKDEEAYEAYKEFGKYHGFGVRKGDCKRDEFGNVTSRRFFCNREGLREAKYYNRVDRVRAHKAETRTNCQAKFSIFLDKTESVWRMRKIDNNHNHELTPHGMVHLIPKYRSMTVAAKDQINGLNQCGISTAKAVRYMAGMAGGYPLVGFLKKDAYNYVDKKRRESIADGDAEAAIAYLEGKTEADPMAMAVYNMTEDGMLGNLFWADGRSRLDYQYFGDVLAFDSTYKKNKYNRPLVIFSGANNHKQTTIFGFGVVMDETIASYTWLLEKLLEVMCGRQPSVVVTDGDESMRKAICEVFPSATHRLCAWHFEKNVTSNVKEVALRERFNRCLFWDMTVDEFLMEWSNTVEEFGLEESLWANQVFYKKEMWVNAYLREKFCACIRTTSRCEGVNAIAKNFLQSKGTLLELVQNLELMVKDYSNNELLAQFRTIDGIPVMTTSLESLERDAAETYTKAVFGDVRLEIERVAVVNLVRLGRSLTTKIYTLEDYGFSGRNVIVLFDINMGMMKCSCGRWCKNGYPCRHMFFVMKSEHLKQIPRHLILKRWTRDAKSLDEYVEKTKDNGDRSFLLCHGALHTASQWLFFLGAQKFHLYEKAMKTIRELCAELERECAHGQGGTPLNPRGVVRDPNVAKTKGAPKYSKRIHNKRLCTECKNTGHNKRKCPDVKRIPKKKVLYDGAFEYDELEEAEMLWSKYEFEGYYYLQF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30374g00008 762 SMART 26again6 565 592 IPR006564 GO:0008270
Stsc30374g00008 762 Pfam MULE transposase domain 277 371 IPR018289 -
Stsc30374g00008 762 MobiDBLite consensus disorder prediction 1 43 - -
Stsc30374g00008 762 MobiDBLite consensus disorder prediction 18 41 - -
Stsc30374g00008 762 Pfam FAR1 DNA-binding domain 67 155 IPR004330 -
Stsc30374g00008 762 Coils Coil 647 667 - -
Stsc30374g00008 762 PANTHER OS01G0519700 PROTEIN 48 704 - -
Stsc30374g00008 762 Pfam SWIM zinc finger 566 582 IPR007527 GO:0008270
Stsc30374g00008 762 ProSiteProfiles Zinc finger SWIM-type profile. 558 590 IPR007527 GO:0008270
Stsc30374g00008 762 SUPERFAMILY Retrovirus zinc finger-like domains 699 729 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30374g00008 Stsc-Chr30374 52748 56099 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30374g00008 MULE 2.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30374g00008 - - adu:107493380 865.144