Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30365g00008 ATGGCGCAATTGCCTCCTAAGATCCCAAACATGTCGCCAACTTGGCAAGACTTCTCTTCTCTTCAGAAAATGCCACCAAATTTCGCATCTCCGCCGCAGCAAAACTTTGCGGCGAACAATGCAAGCCAGTATCAGCTTCATCAGAACCCGTCCTGGGTGGACGAGTTCCTGGACTTCTCCTGCGCCAGGAGAGGCGCCCACCGCAGGTCGGTGAGCGACTCGATCACCTTCCTGGAGGCGCCTCTGCTGGCGGAGGAGAATCCTAAAAGGAATGAGGAGAGTGAATTCGACAAGTTTGATGATGAGCAATTCATGTCCATGTTCACGGACGAGATTGCCGGAGGAATCCCGATGCCGCCAACGTTGTCTTCTTCAAACACTACAAGCGACGAGAAAGAAACGACGAGTTGCCAGAATAATGAGGTTGGGAAGAAGAATTGGAAGGAGAAAGAGGAGGTGGAAGATGGGCACCATCACCACCAAAAGCAGCAAAGGAAATTGAATTTGAAGAATGAAGCGGATGAGGTTGAAAGCCAATGCAAAGAAGAAGAAGAAGAAACTGATAATAATGCATTGGGCTCAAACAATAATATTAATGTTGCTTCTTCCAATGAACGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGTTAGAGAGAAGTGTAACTTCATTACAGGCGGAAGTTTCAGTGCTGTCACCGCGGGTTGCATTCTTGGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGCTATCAAGCAAAGAATCGCTGCCCTTGCACAAGATAAGATTTTCAAAGACGCTCATCAAGAAGCACTAAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAGAACCTTAAGAAGATGGAAAACAACAATAATAATGCAGCATGCTCATCACCCTTGAGAATTGATGTTGTTCATCAGAATAACAATAACATCATTAATGTTGACAAGGAACAAATTCTTAATGTTTGA 1047 0.4479 MAQLPPKIPNMSPTWQDFSSLQKMPPNFASPPQQNFAANNASQYQLHQNPSWVDEFLDFSCARRGAHRRSVSDSITFLEAPLLAEENPKRNEESEFDKFDDEQFMSMFTDEIAGGIPMPPTLSSSNTTSDEKETTSCQNNEVGKKNWKEKEEVEDGHHHHQKQQRKLNLKNEADEVESQCKEEEEETDNNALGSNNNINVASSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSAIKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMENNNNNAACSSPLRIDVVHQNNNNIINVDKEQILNV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30365g00008 348 Coils Coil 290 310 - -
Stsc30365g00008 348 CDD bZIP_plant_RF2 212 262 IPR044759 GO:0003700|GO:0006355
Stsc30365g00008 348 Pfam bZIP transcription factor 211 255 IPR004827 GO:0003700|GO:0006355
Stsc30365g00008 348 Gene3D - 210 263 - -
Stsc30365g00008 348 MobiDBLite consensus disorder prediction 143 177 - -
Stsc30365g00008 348 MobiDBLite consensus disorder prediction 9 35 - -
Stsc30365g00008 348 MobiDBLite consensus disorder prediction 114 202 - -
Stsc30365g00008 348 FunFam Basic leucine zipper 61 210 283 - -
Stsc30365g00008 348 Coils Coil 159 186 - -
Stsc30365g00008 348 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 214 229 IPR004827 GO:0003700|GO:0006355
Stsc30365g00008 348 MobiDBLite consensus disorder prediction 119 142 - -
Stsc30365g00008 348 SMART brlzneu 207 271 IPR004827 GO:0003700|GO:0006355
Stsc30365g00008 348 PANTHER BASIC LEUCINE ZIPPER 34 1 319 - -
Stsc30365g00008 348 SUPERFAMILY Leucine zipper domain 211 265 IPR046347 GO:0003700|GO:0006355
Stsc30365g00008 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 209 261 IPR004827 GO:0003700|GO:0006355
Stsc30365g00008 348 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30365g00008 Stsc-Chr30365 32325 33996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30365g00008 1 288 bZIP Transcription Factor Family AT2G42380 57.986 2.20e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30365g00008 bZIP_1 3.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30365g00008 - - gmx:100101874 376.326