Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30365g00003 ATGATGAAAGACAGTCAGAAGAACAAATGTGGATCTTCTTCTCATCAATCCTTGAAGGAAAAGGAAAAGCACCATCTTGATAAAATTCAATCAATTTTCATCAATCTTCAGTCTGCAAGGAAGGACAATAGGTATAAAGACATTGTTATGTTTGAGGAGCAGATGCATCAGCTGCTTAGAGAGTGGAAAGCAGAACTAGAGTCTCCAGCTACATCCTTAGCTGAAGGAAGCCTTGGTTCATTTCCGGGGGAGCTGGCTCAACTTTTGCAAGAACTTGAGGAGAACGATGATGCAATCAGTCCATTAAAAAAGCCTGAAACATTGAAGACTGAGCTGCATCCTCACATTGTTCATGACGGGAACTATACGTCTTTTCATGAAAAGTCTTTTGATGATACCCACATGCTAAATGATACTTTTGAAGGATTTGGTCAGTTTGATGGCCCCGCTTCAACTCTACAAAATGATACCTCTGATATGATTACTCAGTTGGATTCCCATACACTCGTTATGGAAGAAAGCTTTGATTATGGTCAATTTTTCGAAAATGAGGCCAAGCAGTGTGAAGAGGATACTATGCCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCCTTTTTAGGCCCTAAATGTTCTCTATGGGATTGTTTCAGACCTGCTCAAGGGTTACAAGTTTGCCAGGACTACTGCAGCAGTGGTCATGAGCTTTTGGCAAATAACGAGGCTCCTGAGTTATTTGATCTCTCTTTTCTTGAGGGTGAAACTTTGAGGGAGTGGCTCTTCTTCGACCAGCCTAGAAGAGCATTTGTGAGTGGAAATAGAAAGCAGAGGTCGCTCCCAGATTACAATGGGCGTGGCTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGGGGACATAAGAGGTCCTATTATATGGATCCCCAGCCCCTAAGCTATCTCGAGTGGCATTTGTATGAGTATGAGATCAATAACGAAGATAGCTTAGCATTGTATCGACTGGAACTAAAGCTTGTCGATAATAAAAAGAAAAGTCCTAAAGCTAAATTGACAAAGGAATCTCTTGCTGATTTACAAAATAAGATGGGAAAGCTAAGTGCTGATGTCCTTGTAGATGATGGAAGCATCGTTGATGGGAAAATAAAAGCTAAGTCTGAGAATGGTGGATCTCCTGAGCATGAAACAAAAAATCCAGAGTGA 1206 0.4146 MMKDSQKNKCGSSSHQSLKEKEKHHLDKIQSIFINLQSARKDNRYKDIVMFEEQMHQLLREWKAELESPATSLAEGSLGSFPGELAQLLQELEENDDAISPLKKPETLKTELHPHIVHDGNYTSFHEKSFDDTHMLNDTFEGFGQFDGPASTLQNDTSDMITQLDSHTLVMEESFDYGQFFENEAKQCEEDTMPNILPNICPPPSAFLGPKCSLWDCFRPAQGLQVCQDYCSSGHELLANNEAPELFDLSFLEGETLREWLFFDQPRRAFVSGNRKQRSLPDYNGRGWHESRKQVMKEHGGHKRSYYMDPQPLSYLEWHLYEYEINNEDSLALYRLELKLVDNKKKSPKAKLTKESLADLQNKMGKLSADVLVDDGSIVDGKIKAKSENGGSPEHETKNPE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30365g00003 401 MobiDBLite consensus disorder prediction 1 23 - -
Stsc30365g00003 401 MobiDBLite consensus disorder prediction 382 401 - -
Stsc30365g00003 401 Coils Coil 350 370 - -
Stsc30365g00003 401 PANTHER TRANSCRIPTION FACTOR VOZ1 242 392 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30365g00003 Stsc-Chr30365 13610 16627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30365g00003 1 370 VOZ-9 Transcription Factor Family AT1G28520 45.497 2.18e-112 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Stsc30365g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30365g00003 - - psat:127101646 512.686