Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30364g00010 ATGGCAAATATATGGAAGGTGGTGAAGCTGCCAGTTTTGCCGATGGTGGTTGCTCAGATAGCAAATGCATGCGCGTATGTTCTCTTCAAGCTTGCTGTTAACGATGGCATGAGTCGCAGAGTGCTTGTTGCTTACCGCTATATCTTTGCTACTGCTTTCATTACTCCTCTTGCTTGTATTCTTGAGAGGGGAGCAAGAACAAAGATCACTAAAACTATTCTCTTTCAATCGTTTTTGTGCGGTTTATTCGGGGGAGCAATGCCCCAAAACTTACAAATGGAGGCACTTGCTTTAACTTCCGTAACCTTTGCAACCGCCATATCCAATCTCATTCCAGCCATCACGTTTATCCTATGCCTCTCCTTCAGAATGGAGAAATTGAACGTGAGAAGTGCGGCAGGGAAGGCAAAGATAATAGGAACAATAGTTGGGATTGGTGGTGCAATGGTGATGACATTCTACAAAGGCGTGCCAGTTAAGATGCTATCCTTCCACATTAACCTCTTCAATAATAGCCATCACTATGGAAGCACCCACTCAAGCCATAATGGCTCGTTGTTCTTGTTGGGCTCTCTGTCATCGTTGTTGAGCAACGCCTCTTATGCATTGTGGCTCATCATTCAGGCAAAGATGAGCAGAGCTTTTCCGTATCCATACTCGAGCACTGCCCTCATGTGTGCAATGGCAGTTCTCTTATCCACTCTCCTTACATTTTGCATTGACAGCAAGGATTTGAGTCAGTGGAAACTCGGTTGA 756 0.4497 MANIWKVVKLPVLPMVVAQIANACAYVLFKLAVNDGMSRRVLVAYRYIFATAFITPLACILERGARTKITKTILFQSFLCGLFGGAMPQNLQMEALALTSVTFATAISNLIPAITFILCLSFRMEKLNVRSAAGKAKIIGTIVGIGGAMVMTFYKGVPVKMLSFHINLFNNSHHYGSTHSSHNGSLFLLGSLSSLLSNASYALWLIIQAKMSRAFPYPYSSTALMCAMAVLLSTLLTFCIDSKDLSQWKLG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30364g00010 251 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020
Stsc30364g00010 251 PANTHER WAT1-RELATED PROTEIN 11 250 IPR030184 GO:0016020|GO:0022857
Stsc30364g00010 251 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30364g00010 Stsc-Chr30364 45454 47326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30364g00010 12 251 Nodulin-like Gene Family AT1G25270 41.250 2.65e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30364g00010 - - gmx:100788378 296.589