Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30361g00013 ATGGGCAGCATGTCTGTGACAAGAACAAAACAGAGTCTAGTTAAGCCAGCTGAAGAGACACCATTGACCACACTAGACCTATCAATGATAGATAAGATACCTGTTCTAAGGTGCGATGCAAGAACCTTGCATGTGTTCAGGCATGGCCCTGAAGCTGCAAGTGTAATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTACTACCCTCTTGCTGGACGCCTCGTAACTCATAAATCATCAGAAGCAGGGTGCCTCCAGGTTCAATGCTCTGGAGACGGTGTCTGGTTTGTTGAGGCCTCTGCTGATTGCACCCTTCAATCTGTTCATTTCTTTGATGACATTCACTCCATTCCATATCATGATCTTCTTCCTCCTGATATTCTTGAAACCCAAGGCATTGACCCCCTTGTCAAGATGCAGGTGACACAATTTGCATGCGGAGGATTTGTGATAGGGCTGGTATTCTGCCATACCGTATGCGATGGCCTTGGTGCTGCACAATTTCTGAATGCTGTAGGGGAGCTAGCTAGGGGTCTTCACAAGCCCGTCATTGAACCGATCTGGCACAGAAACTTCGCTCCGTCACCGTTACCGGTACCGTCACTGTCACTCCCAAAACTACCACCACCAATGCCGAGCTACAAGCTAGAACACGCGAACATAGACATCCCCATGCATGGAATCAACAACCTCAAGCAAGAATTTCAGCGGCTCACGGGACTCGCTTGCTCTTCCTTCGAGATCGTAGCCGCGGGATTATGGAGAAGCAGAGCAAGAGCCATTGATTTCGAAGCAAGCGCGGATCTGAAGCTTGTGTTCTTCGCAAACTGCCGTCAAATCTTGGAGCCTCCTCTCCCCGCCGGGTTCTACGGTAACTGTTTCTTCCCAGTGACGATCACCGCTTCGTGCGTGAGAGAGGCATCGATCTTCGATGTGGTGAAGATGATACAAGACGCAAAGACGAAATTACCCTCCGAGTTTGGCAGGTATTTGAAGGGTTCGGGCAGCGATGATCCTTTTGCGCCTCCTTTGAGCTACGGGACGCTGTTCATATCGGAGTGGGGGAGGCTGGGATTCAACAACGTTGACTACGGGTGGGGTCCACCTGTACACGTGGTGCCCATACAAGGGTCCAGCATAATCCCCGTGGGAATTGTGGGGTACATGCCTCTCACATTGCTCCCAAAGAAGGGGATTCGTTTGATGACGTGGTGCGTGGAGCAGGATCATCGTCATGCATTCCTCCACCAAATGCATGCTCTCATGGATATATGA 1275 0.5035 MGSMSVTRTKQSLVKPAEETPLTTLDLSMIDKIPVLRCDARTLHVFRHGPEAASVIREALSRALVPYYPLAGRLVTHKSSEAGCLQVQCSGDGVWFVEASADCTLQSVHFFDDIHSIPYHDLLPPDILETQGIDPLVKMQVTQFACGGFVIGLVFCHTVCDGLGAAQFLNAVGELARGLHKPVIEPIWHRNFAPSPLPVPSLSLPKLPPPMPSYKLEHANIDIPMHGINNLKQEFQRLTGLACSSFEIVAAGLWRSRARAIDFEASADLKLVFFANCRQILEPPLPAGFYGNCFFPVTITASCVREASIFDVVKMIQDAKTKLPSEFGRYLKGSGSDDPFAPPLSYGTLFISEWGRLGFNNVDYGWGPPVHVVPIQGSSIIPVGIVGYMPLTLLPKKGIRLMTWCVEQDHRHAFLHQMHALMDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30361g00013 424 Gene3D - 204 416 IPR023213 -
Stsc30361g00013 424 Gene3D - 2 203 IPR023213 -
Stsc30361g00013 424 PANTHER ACYL TRANSFERASE 4 4 420 - -
Stsc30361g00013 424 Pfam Transferase family 4 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30361g00013 Stsc-Chr30361 77698 79450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30361g00013 4 381 Monolignol Biosynthesis Gene Families AT5G48930 28.087 1.42e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30361g00013 - - ahf:112759019 740.725