Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30361g00004 ATGGCGCCAAATCCAAAGGTGGTAGCAGCCTATCGTGCAATGGCCAATCTTGGGATTCATGAATCAAAAGTGAAGCCAGTACTAAAGAAGCTCCTTAAGTTGTATGATAAAAACTGGGAGCTTATAGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGAGGAAAACCCGGTCTTGGAGACGGAGCAGGAAAAGAAAAACAAGAGAGTTGATGAAGCAGAGTTAGACGATGAAGTGCAAGATCAGCCACTGCGACCTAAAAAGAGGTTGCGCTTGAGAGGCCCAGAGTTTCAGTCTTCAAATCATCAGATTATCAGTGGTTCCAGTTCAGCTTCTTTTCCATTGAAAACTCCTAAATTAGAAGATGACATAGTACCTGGAAATGGTTCTATACTGCATGCTCAAAGTGCAGCAGCATTATCTGATGGAAATGGAATCATTGAAGCTCATCAAGTTCATCCACAAGATGGCATTATTGACAAGGGAAAGAAACCTGTATCACCTCAAGTTACTCCCAGAGGAAGATCTACATCGGATGGGGTTCTACCAGCAGTAACATCTAAAGAACCAGCTGTTGAACCACTGAGCACTTTGTCTCCAAGAAGCAAAATTACCCATCCTCTTTCGTGGATAAAGCCCAAGGACGAGCCAATTGATGACGTGCTAGATAATGAGGCTCCCATTTCAGTGATTCCTCCTGAACCATCTAGTGGAAGGGATTCTTCATTGAAGAATGGTGCAGTTGGACAGCAAGATTGTGACGACATTGTGGCGTCACATTGCATAAATGATGAAGTTATTGGTGAAGATAACCTCCGTTCTTCAAATGAAGATGCCCCTTCTAATGTAGAGATAGCCTCATCAACCATGCAAGAGGAAGGATCTGCGAAGATAACACCAGACATTGGCATGCCAAAGGAATCTGAGTCACACGATTCTCTGGTTGCCGGAGGAAATGAAGATCTAGTTACACCTTGCATTTCAAATGGATCAGCCAATGATAATCCATCTTCTTCCTTGCCCCCTACTGAAATTCCAGTTTCTCTGCCCTGCCCGGGTGGTCTGGATGACGCCGCACCAATTCCCCAGGAGGTTGGAAATAATGATTACTTAGCAAGTGACGACGGAAGGGAGCTAGTGGATCCTATATCTACGAATTCACATAGTTTAGTGACTGCTCCAAAGAATCAGATTACTCCTAATGCCATAATGACTGTTCACAATGTTAATGACATAACAAAGGGAGAAGAAAAATTGAAAATTTCATGGGTGAATAACATCAATGATGATTTCCCACCATCCTTCCATTACATACCCCGAAACATTGTATTCCAAAATGCTTATGTTAATATTTCTCTATCTTGTATTGGGAATGAAGATTGCTGTTCAACTTGTATGGGCAATTGTGTCTTGTCTTCTGAATCATGTTCTTGTGCAAATAAAACTGGTGGTGGATTTGCCTACACTGCAGAAGGTCTACTGAAGGAAGAGTTCTTGGATGAGTGCATTGCCATCAGCTGCAACCCTAAAAATTGTTTCTATTGTGAAGACTGCCCAGTTGAAAGATCAAAGAATGATGATTGTTCAGAACCTTGTAAAGGACACATAAGGAGGAAGTTTATTAAAGAATGCTGGAGTAAATGTGGCTGTGGTAAAAAATGTGGCAATCGGGTTGTTCAACGAGGAATAACTTGCAACTTACAGGTATTTTTAACTTCTGAAGGAAAAGGTTGGGGTCTTCGGACATTAGAGGACCTTCCCAAAGGGGCATTTGTATGTGAGTTTGTTGGAGAAATTTTAACCGTCAAAGAATTGCAAGAGAGGAGCCTAAAATATCCCAAAAATAGGAAATGTACATACCCAATTCTATTGGATGCAGATTGGGAATCAGGAGGTGTGAGGGATAAAGAAGCTCTTTGCTTGTATGCAGCATCTTATGGAAATGCTGCTAGGTTTATTAATCACAGGTGTTTAGATGCTAACTTGGTTGAGATCCCAGTTGAAGTTGAGGGCCCAGATCATCACTACTATCATTTTGCCTTATTCACATCCAGAGAAATAGCAGCACAGGAGGAGCTTACTTGGGATTATGGCATCAACTTCGATGACCATGATCAGCCTGTTGAACTGTTTGAGTGCAAATGTGGAAGTAAATTCTGCAGGAATATGAAGCGATCAAGTAGATCCGCAAGATCGTTAGCTGCAAGATGA 2223 0.4184 MAPNPKVVAAYRAMANLGIHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEEENPVLETEQEKKNKRVDEAELDDEVQDQPLRPKKRLRLRGPEFQSSNHQIISGSSSASFPLKTPKLEDDIVPGNGSILHAQSAAALSDGNGIIEAHQVHPQDGIIDKGKKPVSPQVTPRGRSTSDGVLPAVTSKEPAVEPLSTLSPRSKITHPLSWIKPKDEPIDDVLDNEAPISVIPPEPSSGRDSSLKNGAVGQQDCDDIVASHCINDEVIGEDNLRSSNEDAPSNVEIASSTMQEEGSAKITPDIGMPKESESHDSLVAGGNEDLVTPCISNGSANDNPSSSLPPTEIPVSLPCPGGLDDAAPIPQEVGNNDYLASDDGRELVDPISTNSHSLVTAPKNQITPNAIMTVHNVNDITKGEEKLKISWVNNINDDFPPSFHYIPRNIVFQNAYVNISLSCIGNEDCCSTCMGNCVLSSESCSCANKTGGGFAYTAEGLLKEEFLDECIAISCNPKNCFYCEDCPVERSKNDDCSEPCKGHIRRKFIKECWSKCGCGKKCGNRVVQRGITCNLQVFLTSEGKGWGLRTLEDLPKGAFVCEFVGEILTVKELQERSLKYPKNRKCTYPILLDADWESGGVRDKEALCLYAASYGNAARFINHRCLDANLVEIPVEVEGPDHHYYHFALFTSREIAAQEELTWDYGINFDDHDQPVELFECKCGSKFCRNMKRSSRSARSLAAR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30361g00004 740 Pfam Pre-SET motif 416 561 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc30361g00004 740 SUPERFAMILY SET domain 423 725 IPR046341 -
Stsc30361g00004 740 Gene3D SET domain 396 519 IPR046341 -
Stsc30361g00004 740 Pfam SET domain 581 702 IPR001214 GO:0005515
Stsc30361g00004 740 MobiDBLite consensus disorder prediction 63 85 - -
Stsc30361g00004 740 MobiDBLite consensus disorder prediction 230 252 - -
Stsc30361g00004 740 MobiDBLite consensus disorder prediction 291 316 - -
Stsc30361g00004 740 Gene3D - 1 60 IPR043017 -
Stsc30361g00004 740 ProSiteProfiles Pre-SET domain profile. 455 566 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc30361g00004 740 SMART set_7 569 708 IPR001214 GO:0005515
Stsc30361g00004 740 MobiDBLite consensus disorder prediction 62 85 - -
Stsc30361g00004 740 CDD SET_SETDB-like 437 702 - -
Stsc30361g00004 740 ProSiteProfiles SET domain profile. 569 702 IPR001214 GO:0005515
Stsc30361g00004 740 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 740 IPR025776 -
Stsc30361g00004 740 SMART preset_2 413 553 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc30361g00004 740 MobiDBLite consensus disorder prediction 161 186 - -
Stsc30361g00004 740 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Stsc30361g00004 740 Gene3D SET domain 520 705 IPR046341 -
Stsc30361g00004 740 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30361g00004 Stsc-Chr30361 30307 37548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30361g00004 545 727 C2H2 Transcription Factor Family AT2G23740 41.081 1.52e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc30361g00004 Pre-SET 4.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30361g00004 - - gmx:100788602 937.562