Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30360g00011 ATGGTGGATGAAGAAACATGGAGTGAAATTGAAGCTTGCCAAAATGGTGACAATATTGTAAGCTCTTCATATTCGGTATCAAAGATGTTAACTGAGAAAGCTGCATTGGAGTTTGGAGAAAAGAATGGTTTGGAGGTTGTGAGCTTGGTTCTTCCTTTGGTGGTTGGACCTTTTATTTGTCCCAACATGCCTTCATCTGTGCACATAGCACTCGCCATGATATTAGGAGACGATAGTAAATACAGGTATCTAAGGAACTCATACATGGTGCATGTGGATGATGCTGCCAATGCACTTATATTTCTTTTTGAATATGCTAATGCTAATGGAAGATACATTTGTTCTTCAGACCAAGTATCATTCTATCAGCTTCATCAATTACTTTCTCAAAGATACCCACACCTTCATATATCACTACCCGAGTAA 426 0.385 MVDEETWSEIEACQNGDNIVSSSYSVSKMLTEKAALEFGEKNGLEVVSLVLPLVVGPFICPNMPSSVHIALAMILGDDSKYRYLRNSYMVHVDDAANALIFLFEYANANGRYICSSDQVSFYQLHQLLSQRYPHLHISLPE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30360g00011 141 Gene3D - 1 141 - -
Stsc30360g00011 141 Pfam NAD dependent epimerase/dehydratase family 20 107 IPR001509 -
Stsc30360g00011 141 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 133 IPR036291 -
Stsc30360g00011 141 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30360g00011 Stsc-Chr30360 86850 88154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30360g00011 2 137 Monolignol Biosynthesis Gene Families AT2G02400 31.884 3.33e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30360g00011 - - vvo:131601497 196.823