Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30360g00008 ATGTTGGATGAAGAAACATGGAGTGAAGTGGAAGCTTTCCAAAATGGTAACAATATTGCAAGCTCCTCATATATTGTATCAAAGACGCTAACTGAGAAAGCTGTGTTGGAGTTTGGAGAAAAGAATGATTTGGAGGTTGTGAGCTTGGTTCTTCCTTTGGTGGTTGGACCTTTTATGTCTCCCAACATGCCTTCATCTGTGCACAAGGCACTTGCCATGATATTGGGAGACGATGATAGTATATTCAAGTATTCAAGTGATTTATACATGGTGCATGTGGATGATGTTGCCAATGCACTCATATTTCTTTTTGAATATGCTAATGCTAATGGAAGATACATTTGTCCGTTCCAACAAGTAACATTCTATCAGCTTCATCAATTACTTTCTCAAAGATACCCAGACCTTCATATAACACTACCCAAGGGTCTATCATCAAAGAAGCTGTTGGATGCAGGATTTAAGTTTAAGCATGGCATCAATGAAATATATGATGGAGCTATCAACTGCTGCAAAGACAAAGGCTTTCTGTAA 534 0.3839 MLDEETWSEVEAFQNGNNIASSSYIVSKTLTEKAVLEFGEKNDLEVVSLVLPLVVGPFMSPNMPSSVHKALAMILGDDDSIFKYSSDLYMVHVDDVANALIFLFEYANANGRYICPFQQVTFYQLHQLLSQRYPDLHITLPKGLSSKKLLDAGFKFKHGINEIYDGAINCCKDKGFL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30360g00008 177 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 174 IPR036291 -
Stsc30360g00008 177 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 163 - -
Stsc30360g00008 177 Pfam NAD dependent epimerase/dehydratase family 20 108 IPR001509 -
Stsc30360g00008 177 Gene3D - 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30360g00008 Stsc-Chr30360 59938 61655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30360g00008 2 177 Monolignol Biosynthesis Gene Families AT2G02400 29.947 1.69e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30360g00008 - - vvo:131601497 208.379