Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30356g00002 ATGGAAGGAAACAACAATGGTGGATGCTGTTGTGGAAGTTTTGTTCAGAGGTGCAAGCCTTACATAGCAATGATATCTCTGCAATTTGGGTATGCTGGGATGAACATAATCACAAAGGTTTCCCTCAACCGTGGCATGAGCCACTATGTTCTTGTTGTCTATAGACATGCCTTTGCCACTGCTGCTATTGCTCCCTTTGCTCTTGTTCTTGAGAGGAAAGTCAGGCCTAAGATCACATTCCTTGTGTTCATCCAAATGTTTCTGTTGGGTCTTCTTGGGCCTGTGATTGATCAGAACTTATACTATATGGGTTTGAAATTTACATCCCCAACATACTCATGTGCTATAAGCAACATGCTCCCTGCAATGACCTTTGTCATGGCGGTTATCTTCAGGATGGAGAAATTGGACATGAGAAAAGTGAGGTGCCAAGCTAAGGTGATTGGAACAGTGGTAACAGTAGCTGGGGCAATGTTAATGACATTGTACAAAGGCCAAGTCATTAACTTCTTCTGGTCTAATTACATGCACCACCCAAGAAACTATGTGCCTGACAACACCACCACTACCACTGCCTCTGGTGAAACAGATTGGGTGAAGGGCTCAATTCTTCTCATATTTGCTACCCTTGCTTGGGCTTCCTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACTCAGCTCAGCTATCTCTAACTGCCATAGTGTGTTTCTTGGGAACACTGCAATCAATAGCAGTGACCTTTGTGATGGAGCATAGTCCAAATGTGTGGACCATTGGCTGGGACATGAACTTGCTAGCTGCAGCCTATGCTGGAATAGTGTCATCAGGTATAGCATACTATGTTCAAGGGATAGTGATGCAAAGAAGAGGGCCAGTTTTTGTGACTGCTTTCAGCCCTTTGATGATGATCATTGTAGCTGTTATGGGATCTTTCATCCTTGCAGAAAACATATACCTTGGAGGTGTAATTGGAGCAATTCTTATAGTAGTGGGACTCTACTCAGTTCTATGGGGAAAATACAAGGAGCACAAAGAGAAGGAAGCAGAAAATATCATCTCTCATGATGAACCAATTAAGTGCTGTGCTGATGACCAAATTATTGGAAGATTGGAAACAGTGATTGAAGATTCAGAATCAAACGACATTGAGATGCAAAAGGGTGATCATAATAAAGCTTGCAAAAAACTAAGCCTAACAATAATTAGTAACAACAACAACAATGATGATGTTACAAAAGCTTGA 1248 0.4175 MEGNNNGGCCCGSFVQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLVFIQMFLLGLLGPVIDQNLYYMGLKFTSPTYSCAISNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTVVTVAGAMLMTLYKGQVINFFWSNYMHHPRNYVPDNTTTTTASGETDWVKGSILLIFATLAWASFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTFVMEHSPNVWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQRRGPVFVTAFSPLMMIIVAVMGSFILAENIYLGGVIGAILIVVGLYSVLWGKYKEHKEKEAENIISHDEPIKCCADDQIIGRLETVIEDSESNDIEMQKGDHNKACKKLSLTIISNNNNNDDVTKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30356g00002 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 343 - -
Stsc30356g00002 415 PANTHER WAT1-RELATED PROTEIN 19 349 IPR030184 GO:0016020|GO:0022857
Stsc30356g00002 415 Pfam EamA-like transporter family 21 161 IPR000620 GO:0016020
Stsc30356g00002 415 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020
Stsc30356g00002 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30356g00002 Stsc-Chr30356 3478 6046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30356g00002 11 392 Nodulin-like Gene Family AT5G07050 64.675 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30356g00002 - - gmx:100793545 625.55