Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30355g00005 ATGGCGAAAAGGCCCCCGAGATTAGCTGTGCAGTATGAGAAAGATCAATCTGGTTGCATGTGGGGTTTTATTAGTATGTTCGATTTTCGGCATGGCCGCTCTACTCGCAAGATGATTGCGGATGCAAAGTGCAGCAGCAAGCATGCTGTAGGTGCTGTACCAGTACCTACCAAGAACAAGTTTGAGACATTAACCGATTTGGACGAAGAATATCAAGGCCATCTCGAAAGAGGAGAGAGTATGAGACTGATAGAGATAACCGATCCAGATAAGCCTAGTATGAAGAAACTCATAGAAGAAGAGATGTTCATCGACAGGGATGCGGTGAAGGATCTAGGTCATGCTGATCAATTAGAGTCAAATAAATCCAGAGTAGCAAGTGAAGTTTCCCCAAAGACAGATTCCAAAAGAAAAAAGAAATCTCGAAAGAAAAGCCGCGACGGGGACAACCATGAATTGAATTCGGATGCAATGCTTAAGTCTGAATTCTTGCATAATCTGCATTCAAAGCAACTGTCAAAAGATAATCTTGATTTAGACAAGATAACGGAAGACTTATGTGACGTTAAGGGTGGTTGTTCTGTGATGCATGACAATGACAGCGAAGTTAATTCACAATCAAACCAAAATTATGGTGTTTCTGAAAACCTTGCAAGGGATGCAATCCATGAATTTGTGAATCAAATGATAGCAAATGGGAAAGATCAGGCAGAAGATGGAAAATCCAGTTGCTCAAATGAACTTATGGAAGCACTTCAGGTTATAAGCTCGGATAAGGAACTGTTTGTTAGACTTCTACAAGACTCGGATTCAATTTTATTGAAACATGTTCAGGAGTTGGGGAATTCTCAGGCAACAAATGAGAATGAACACAACTCGGTTATTAGCTCCAAGCTCTCTGTAGAAGAAGACCTTGACAATCCGAAACAAGAAAAGGAGACTTTCAACCGTAAACATCTTAACTTTTTCAGGAAAAGGTCAAAGTCTCAATCAGAAGGTCCACCAAATGAAAATGGGAAAACAGAGTTTACCAATAGAATTGTCATTCTGAAGCCTGCACTAACAAGCTCACGAAGTTCGGGAAGCATCCTTGCCTCTTCGCTTGATTCTCATGATGTTGTCCACCACAAAGGTCGTTTTGTGAAAGTTAGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCCATTGGAAGGGAGAAACATGGAAATGCCAAAGGGATCTCAAGAAAGCTTCCGGATGAATGTCAAAATAAGGGGCTAGGAAGCAAAACAATTGGGAAAGACAATAATGTTGGAATGAGGTCTCCCAATAAAGACCATTTCTTCATGGAAAAAATTGCAAGACCTGTGTTTGATGTTACGAATGGAAACAAGACCGATGCTTCGAAAGACTCCGAATTTAGTGTGGAACAAGAAAATGGCAGTTCCAGACAAAGGGTTTCTAACTTATATATTGAGGCTAGGAAACATCTGTGTGAGATGCTAGACGATGGAGATGAGAACACAAACATTTCAAGTAGACAGAGCCCGAAAACCCTTGGCCGAATACTATCTATTCCTGAGTTCAACTTTTCTCCCCTTGGCAGTCCCGGAAGGGATTTCGAGCATCATCTTGTGACCACAAAGACAAGATTTTCTGTCTCAGATAGACCTTCAGAGGTTAATGAGGATAATTTGTCACCCAAACAAGCAACCTTCGTCGATCCTCTGGATCAGGCAACAAGCAATTCAGAAAAGCAGTCCAGCATTTGTGATGAAATCTCTAATAATGAAGTACAAGAAAGTAGTTTGCAGTCCAACTTGGCACATGATCTTGGTGGTGTTGATATAGAGGAGACCTGTTCTCCTGTTATTGATGAGACAGTTACTGAAGTTAATGTAGAATCTGAAAAAGATACAGATATTTTGCAATCATCCCAGATTCCAGTCGGATTCGTCATGGAAAAAGAACAATATTGTGTGATCTCGGAAATTTCTGACAGTGCACAAGGTTCTTCATGTTTAAATCAGGAACTTACAGAAGATATCCAACCATCATCTCCACCATTATCCCCTTCTCTCTCGTCTGTCACAAAGAAAATTGAAGAGTTAGAAAGTGTTACCGATGTGTCCGGCCGACCAAGTCCCATATCTGTTCTTGATACTCCATTCTTGGATGAGGACTCTCCTGGATACTCAAGACGTCATGCTGTTAAATTGCCAGTACGACCGCTGCAGTTTGATGAACCTGACTCTTCTTCGCCTGTGGATCAACTTGAAAGAGGAAAATACTGCTTTGAAGAGAATGAATTGATATATGATTACATTAAAGCTGTCTTGCAAGCATCAAGCTTGACTCCGGATCAGTTGTTGATGAAGTGCCTTTCATCAGACCAGATACTCGATCCTTCCTTGTTTGCTCAGATAGAGTTCTTCCCAAACCCACTTTGCCATGATCAGAAGCTCCTATTCGACTCTATCGATGAAATTCTCACGGAGGTTTGTTGGTATTACTTTGGAGTCTCACCTTATGTATCATTTGTAAATCCTAGCATAAGGCCAACCCCAAGTATGAAAAGGGTTACTCTCAAAGTCTTTGAAGGAGTGTGCTGGCATATCCTTCCCTTGCCCCCACCACGTACCTTGGAACAAATCGTTAGAAAGGACCTGGCAGGGAACGAAACGTGGATGGATCTTCGACCTGATGTTGAAACTGTTGGCTTCGAAATGGGCGAGGCCATTCTTGCTGAACTGATGGAAGATACAATATTGAGCTTTGTAAGTGAAATCCCTGAAAGTGAATGTTGTCAGCTTCAACTTCAAACTGATAACACTGAGAGAACCATCAACTTGTGA 2847 0.412 MAKRPPRLAVQYEKDQSGCMWGFISMFDFRHGRSTRKMIADAKCSSKHAVGAVPVPTKNKFETLTDLDEEYQGHLERGESMRLIEITDPDKPSMKKLIEEEMFIDRDAVKDLGHADQLESNKSRVASEVSPKTDSKRKKKSRKKSRDGDNHELNSDAMLKSEFLHNLHSKQLSKDNLDLDKITEDLCDVKGGCSVMHDNDSEVNSQSNQNYGVSENLARDAIHEFVNQMIANGKDQAEDGKSSCSNELMEALQVISSDKELFVRLLQDSDSILLKHVQELGNSQATNENEHNSVISSKLSVEEDLDNPKQEKETFNRKHLNFFRKRSKSQSEGPPNENGKTEFTNRIVILKPALTSSRSSGSILASSLDSHDVVHHKGRFVKVSSHFSLTEIKRKLKHAIGREKHGNAKGISRKLPDECQNKGLGSKTIGKDNNVGMRSPNKDHFFMEKIARPVFDVTNGNKTDASKDSEFSVEQENGSSRQRVSNLYIEARKHLCEMLDDGDENTNISSRQSPKTLGRILSIPEFNFSPLGSPGRDFEHHLVTTKTRFSVSDRPSEVNEDNLSPKQATFVDPLDQATSNSEKQSSICDEISNNEVQESSLQSNLAHDLGGVDIEETCSPVIDETVTEVNVESEKDTDILQSSQIPVGFVMEKEQYCVISEISDSAQGSSCLNQELTEDIQPSSPPLSPSLSSVTKKIEELESVTDVSGRPSPISVLDTPFLDEDSPGYSRRHAVKLPVRPLQFDEPDSSSPVDQLERGKYCFEENELIYDYIKAVLQASSLTPDQLLMKCLSSDQILDPSLFAQIEFFPNPLCHDQKLLFDSIDEILTEVCWYYFGVSPYVSFVNPSIRPTPSMKRVTLKVFEGVCWHILPLPPPRTLEQIVRKDLAGNETWMDLRPDVETVGFEMGEAILAELMEDTILSFVSEIPESECCQLQLQTDNTERTINL 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30355g00005 948 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 923 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 283 344 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 114 155 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 283 300 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 302 320 - -
Stsc30355g00005 948 Pfam Domain of unknown function (DUF4378) 771 918 IPR025486 -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 327 343 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 459 478 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 404 441 - -
Stsc30355g00005 948 MobiDBLite consensus disorder prediction 458 478 - -
Stsc30355g00005 948 Pfam Protein of unknown function (DUF3741) 227 271 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30355g00005 Stsc-Chr30355 45841 50389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30355g00005 1 906 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.936 1.94e-95 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30355g00005 - - aip:107635037 1673.29