Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30353g00008 ATGGAACTCACCACCATGCTTTACTTGCTTGCTTCATCTTTGTTCTTCATTGTTCTCTTCAAAAAATTCTTCTCTAATTCCAAGAAAGGGAGAGAATTGCCACTCCCTCCAGGCTCCATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTACTCTCAAGACCCAAATGTTTTCTTTTCCACAAAAATCAAGAGGTATGGTTCTATATTCAAGTCCCACATTTTGGGTTGCCCTTGTGTTATGATAGCAAGCTCAGAAGCTGCAAAATTTGTGCTTAACAAAGCACAATTGTTTAAGCCAACATTCCCAGCCAGCAAAGAAAGGATGTTGGGAAAGCAAGCCATATTCTTCCACCAAGGAGAGTACCATGCCAACCTTAGGAAGCTAGTCCTCCGCACCGTCATGCCCGAAGCCATCAAGAACATCGTTAAAGACATCGATTCCATTGCCGTTGATGCCCTTGAATCCTGCCAAGGAAAACCCATCACCACTTTCCTTGAATTCAAAACTTACACATTCAACGTTGCACTGCTTTCGATCTTCGGAAAAGACGAGGTTAAGTACAGAGAAGATTTGAAGAGGTGCTACTACACTTTGGAGAAAGGGTACAACTCAATGCCGATAAATGTTCCTGGAACACTGTTCCACAAGGCCATGAAGGCAAGAAAGGAAATAGCTGAGATAGTTGCAAGAATCATGGAAACAAGGAGAGAGAATAGAGAAGAGAGTTACAATGATTTGCTGGGTTCGTTCATGGCTGAGAAAGCAGGACTCAACGATGAACAAATAACAGATAACATAATTGGTGTCATTTTCGCTGCTCGTGACACCACTGCTTCAGTGCTGACGTGGATCGTTAAATACCTCAGTGAGAATCCAACTGTACTGCAAGCTGTAACTGAAGAGCAAGAATGTATAGTGAGGAGGAAGGAAGAAAGTGGTGAAGAGATTGGACTGAATTGGGAAGATACAAGGAAGATGCCAATCACTTTAAGGGTCATTCAAGAGACTCTAAGGGTTGCTTCAATCTTGTCCTTTACTTTCAGAGAAGCTGTTGAAGATGTTGAGTATCAAGGGTATCTTATACCAAAGGGGTGGAAAGTATTGCCACTTTTTAGAAACATACACCATAGTCCTGACAACTTCAAAGACCCAGAAAAGTTTGATCCTTCAAGATTTGAGGTGGCTCCCAAAGCCAATACGTTCATGCCATTTGGCAATGGGATTCATGCATGCCCTGGCAATGAATTAGCTAAGTTGGAGATGCTGGTGCTTCTACATCATCTCACCACAAAATACAGGTGGTCTGTGGTAGGTGACAAAAATGGCATCCAATATGGCCCTTTTGCCCTTCCCTTAAATGGCTTGCCCCTAAACTTATACCCAAAACATAAATAA 1401 0.4247 MELTTMLYLLASSLFFIVLFKKFFSNSKKGRELPLPPGSMGWPYIGETFQMYSQDPNVFFSTKIKRYGSIFKSHILGCPCVMIASSEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRKLVLRTVMPEAIKNIVKDIDSIAVDALESCQGKPITTFLEFKTYTFNVALLSIFGKDEVKYREDLKRCYYTLEKGYNSMPINVPGTLFHKAMKARKEIAEIVARIMETRRENREESYNDLLGSFMAEKAGLNDEQITDNIIGVIFAARDTTASVLTWIVKYLSENPTVLQAVTEEQECIVRRKEESGEEIGLNWEDTRKMPITLRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKDPEKFDPSRFEVAPKANTFMPFGNGIHACPGNELAKLEMLVLLHHLTTKYRWSVVGDKNGIQYGPFALPLNGLPLNLYPKHK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30353g00008 466 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Stsc30353g00008 466 FunFam Abscisic acid 8 25 463 - -
Stsc30353g00008 466 PANTHER CYTOCHROME P450 26 31 440 - -
Stsc30353g00008 466 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 Pfam Cytochrome P450 36 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 SUPERFAMILY Cytochrome P450 31 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30353g00008 466 CDD CYP90-like 64 441 - -
Stsc30353g00008 466 Coils Coil 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30353g00008 Stsc-Chr30353 50542 53244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30353g00008 1 459 Cytochrome P450 AT4G19230 69.913 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30353g00008 K09843 - gmx:100170674 768.074