Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30352g00008 ATGGGAGATGTGGCTAAGGACCTAACAGCAGGGACTATTGGAGGGGCAGCACAATTGATATGTGGCCACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGTCAGGTTCCCAAGTATGCTGGCGCAATTGATGCTGTGAAGCAGACAATAGCAGCCGAAGGACCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTTGCTACTGTAGCTGCCTTCAATGCCGTCCTATTTTCAGTAAGGGGACAACTGGAGGCATTATTGAGGTCCGAGCCTGGTGTTCCTCTCACAGTAAACCAGCAGATTGTTTGTGGTGCCGGAGCTGGAGTTGCAGTTTCTGTTCTAGCTTGCCCCACTGAACTGATCAAATGCAGGTTGCAAGCACAAAGTGCTCTTGCTGGTTCTGGAGCTGCTACTGTGGCCGTGAAATATGGAGGACCCATGGATGTGGCCAGGCAAGTTCTTCGGTCAGAAGGAGGTGTAAAAGGTCTTTTCAAGGGCTTGGTTCCTACAATGGCACGTGAAATACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCAACTAAGCAATTACTCGCTGGAGGGCGTGATACCTCTGGACTAGGTAGAGGTTCTTTGGTAGTTGCTGGAGGCATGGCTGGGGCTTCCTTCTGGCTCATGGTATACCCAACCGACGTCATTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTACAATTGATGCTTTCAGAAAGATTCGCTCTACCGAAGGGATCAAAGGACTGTATAAGGGTTTTGGTCCAGCGATGGCCCGAAGTGTTCCTGCAAATGCAGCTTGTTTCTTAGCATATGAGATGACTAGATCAGCTCTAGGATGA 894 0.4877 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPTPLPGQVPKYAGAIDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQLEALLRSEPGVPLTVNQQIVCGAGAGVAVSVLACPTELIKCRLQAQSALAGSGAATVAVKYGGPMDVARQVLRSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEATKQLLAGGRDTSGLGRGSLVVAGGMAGASFWLMVYPTDVIKSVIQVDDYKNPKFSGTIDAFRKIRSTEGIKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30352g00008 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Stsc30352g00008 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Stsc30352g00008 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Stsc30352g00008 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Stsc30352g00008 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Stsc30352g00008 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Stsc30352g00008 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Stsc30352g00008 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Stsc30352g00008 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Stsc30352g00008 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30352g00008 Stsc-Chr30352 67520 71187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30352g00008 22 291 Antiporters AT1G79900 33.818 3.52e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30352g00008 K15109 - gmx:100781634 513.457