Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30351g00007 ATGGATTGCAATAAAGAAGAGGCTTTAAGGGCTAAGGATCTTGCCGAAAAGAAGATGCAAGGCAAGGATTTTACAGGTGCTCGTAAATTTGCTCTCAAAGCTCAGCAGTTATTTCCTGATGTGGAGAATATTGCTCAGATGCTTGTTGTTTGCGATGTGCATTGCTCTGCGGAGCAAAAGTTGTATGGTAATGAGATGAACTGGTATAAAATTCTTCAGATTGACCTAACGGCTGACGAGGCAACAATTAAGAAGCAGTACAGGAAGTTTGCTCTCCAACTTCATCCCGACAAGAACAAGTATGCTGGTGCAGAAGCAGCGTTCAAGCTGATTGGGGAAGCACAACGGGTGCTTTTGGATAAAGAAAAACGCTCTGAGCTGGACAGGAAGTGCAGGGTTGCAATGCACAGACCTACCATGGCACCTCATCATCAACAGAAGGTTCCGATGAGTTATAATTCTGTGGTGCAAAACACTGTGAGGCCTAACTTTACGAACTTTAATCCTTGGCAGCCGCAGCAACAACAGTCTACTCAATCTTCTCAACAGGGTCCTAATGGTGGCCGCACTACCTTCTGGACTTCATGCTCATTTTGTTCGGTTAGATATGAGTATTATAGGGAAGTTTTGAATAGATCTCTTCGCTGTCAACATTGCAATAAGCCCTTTATTGCGTATGATATGGATGTTCAAGGTACAACCCCAGCAACTAATCTAGGTCAGCAAGCTTTCACCCAGCGGACATATGGCCTCAATCATGGTGCCGTTAAGGTGGATGTTGGAGCTCAAGGTAATCTGCGTACAAAGAAGTCCAATACTGAATCGAGTACAAAGAAGTCCAATACAGAATCGAGTGCAAAGAAGTCCAATACAGAATCTAGGACAAACAAAGGCTCTAATTCTGATGTCTGCAAAAATCCAAATGGAAAGAGGAGGAGGAGGAGGAAGCAGATGGTTGAATCCAGTGAAAGTGCTGATTCGGTAAGCAGTGATTCTGAAGATGAGATGTTTGCTAACAATGATGGTTTTCCTGATGTACAAAAGAATTCAACTTCAAGAGAAGAGCGTCTACGGAGGTCTACACGGCAAAAGCACCATATTTCCTACAATGAGAATGCAAGTGACGGTGACAACGACGGATCATTTGAGCCTGCAAGAAGGGATACCGAGGGTGGATCATCAAACCCTGCTAATGAAATGAATAATCAAAATGGTTTAGCCTCTGGTCTGAAAGCTAATAAAAAAGGTGCAAAGCGCGACTCTGAAGAGGACTTGGTAAATAGAAATGCGGAAATTAAAGAAGTGAGGGGTGAAGCAGCAGTGGGAGATTCAAAAGCAGATGAAGCTTCAGAGAATGATGATGTCTATCCTGATCCAGAGTTCAGTGACTTCGACAAGGACAAGAAAGAGGAATCTTTTAAACCTGGGCAGATTTGGGCCGTTTATGATATGACAGATGCCATGCCTAGATTTTATGCTTTGATAAAAAAAGTTATGTCCCCTGGATTGAAGTTGCATATAACATGGTTTGAACCAGATCCAGTTGACGATGATGAAATCAGCTGGTCGATTAAGCAATTGCCAATTGCATGTGGAAAGTTTAAACTTGGTAGCATGGACATCATTGAAGGCCAGCAGACATTCTCGCATCAGATTATTTGTCAAAAAGTTGGCCGGAGTTTTTTCTACGTGTACCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAACTGGGATATTAAATGGCATAAGGATTCTGAATCCCATCGGAAGTTTGAGTTTGAGTTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGGCGGAGTAAATGTTGCATACTTGGCGAAGTTGAAAGGCTTTGTGAGTCTCTTCTATCCTATTTTGAAGGACGGTAAACCATATTCTCAAATACCAGCAGCGCAGTTGTTCAGATTCTCTCACAGGGTTCCGTCTTTTCGGATGACTGGTAAGGAAAGAGTAGGTGTTCCTGCAGGATCTATGGAACTTGATCCTGTATCCTTGCCTAGGAATATGGATGAGATCGATGTTCCCCAAGGTTTAAAAGGGAAAATTAGTCAAAGTCCATCTGTTGGGATGAGTTCAAGGTCTCCAAACGCCTTGAAATCCATGAAAAAATCTGGCACAGATGCATCTACTTCTAAGATTATTTTGGAAGGTGGAAATTCAATGGCAAGGACCAAGGCTCCTGGTGATCATATTGCTAATGGTAGTGCTCCTTCAGCTTCAGTGGCAGCAGCTATTCAAGTACCCAAACCACAGTTTTTCGATTTTGATGAGGATAAATCCCCTGGAAGGCTTGATCCTGGTCAGATTTGGGCATTTTATGGCGAAAAGGATGGAGCGTCAAGGAATTATGGTCTGATTATTCGGGTTAATACTAGCCCAAATTTTGAGGTGCATGTTATGAATCTTACTAATTGCTGGCTACCAGATACTGCTGGTAAATGGGAAGACAGGAAAATGATCGTTCCGTGCGGACGATTTCGGATTATACCAAGTCCAGTTTCCCGTATTTATAACGACACCAATTCTTTTTCACATCTGCTGCATCCTGTTACTGATGGCACTGGCAGGGAGAAGGAGTACATCATATTCCCAAGGAAAGGTGAAGTTTGGGCATTATATAGGAGATGGTCAAGCAAAATCAAGCGTACTGATTTGCCGAAGATGGAGTATGACATAGTGGAAGTTCTTGAAGAAGATACTTATAGTTTGGGGACAGCAGTGTTGCCTTTGGAGAAGGTGAATGGTTATCATTCAGTATTTAAGGGCAAACCAAGTGGGAGATCATCTGCAACCCTGAGAATACCTAGTAGAAAATTGCTCATGTTCTCACACCAAATCCCAGCATTCAGACTCACAGAAGAACATGGCAATCTGAAAGGTTTCCTTGAAATTAATCCTCGAGCACTACCTTCTCATTATTTAAATAATGATAGATGA 2964 0.4231 MDCNKEEALRAKDLAEKKMQGKDFTGARKFALKAQQLFPDVENIAQMLVVCDVHCSAEQKLYGNEMNWYKILQIDLTADEATIKKQYRKFALQLHPDKNKYAGAEAAFKLIGEAQRVLLDKEKRSELDRKCRVAMHRPTMAPHHQQKVPMSYNSVVQNTVRPNFTNFNPWQPQQQQSTQSSQQGPNGGRTTFWTSCSFCSVRYEYYREVLNRSLRCQHCNKPFIAYDMDVQGTTPATNLGQQAFTQRTYGLNHGAVKVDVGAQGNLRTKKSNTESSTKKSNTESSAKKSNTESRTNKGSNSDVCKNPNGKRRRRRKQMVESSESADSVSSDSEDEMFANNDGFPDVQKNSTSREERLRRSTRQKHHISYNENASDGDNDGSFEPARRDTEGGSSNPANEMNNQNGLASGLKANKKGAKRDSEEDLVNRNAEIKEVRGEAAVGDSKADEASENDDVYPDPEFSDFDKDKKEESFKPGQIWAVYDMTDAMPRFYALIKKVMSPGLKLHITWFEPDPVDDDEISWSIKQLPIACGKFKLGSMDIIEGQQTFSHQIICQKVGRSFFYVYPRKGETWALFKNWDIKWHKDSESHRKFEFEFVEILSDYVEGGGVNVAYLAKLKGFVSLFYPILKDGKPYSQIPAAQLFRFSHRVPSFRMTGKERVGVPAGSMELDPVSLPRNMDEIDVPQGLKGKISQSPSVGMSSRSPNALKSMKKSGTDASTSKIILEGGNSMARTKAPGDHIANGSAPSASVAAAIQVPKPQFFDFDEDKSPGRLDPGQIWAFYGEKDGASRNYGLIIRVNTSPNFEVHVMNLTNCWLPDTAGKWEDRKMIVPCGRFRIIPSPVSRIYNDTNSFSHLLHPVTDGTGREKEYIIFPRKGEVWALYRRWSSKIKRTDLPKMEYDIVEVLEEDTYSLGTAVLPLEKVNGYHSVFKGKPSGRSSATLRIPSRKLLMFSHQIPAFRLTEEHGNLKGFLEINPRALPSHYLNNDR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 265 305 - -
Stsc30351g00007 987 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 684 - -
Stsc30351g00007 987 SMART dnaj_3 66 123 IPR001623 -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 163 187 - -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 391 409 - -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 413 452 - -
Stsc30351g00007 987 Pfam DnaJ domain 67 128 IPR001623 -
Stsc30351g00007 987 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 260 468 - -
Stsc30351g00007 987 PRINTS DnaJ domain signature 103 123 IPR001623 -
Stsc30351g00007 987 PRINTS DnaJ domain signature 69 87 IPR001623 -
Stsc30351g00007 987 PRINTS DnaJ domain signature 87 102 IPR001623 -
Stsc30351g00007 987 CDD DnaJ 67 120 IPR001623 -
Stsc30351g00007 987 Pfam Domain of unknown function (DUF3444) 455 658 IPR024593 -
Stsc30351g00007 987 Pfam Domain of unknown function (DUF3444) 753 963 IPR024593 -
Stsc30351g00007 987 Gene3D DnaJ domain 64 187 IPR036869 -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 687 713 - -
Stsc30351g00007 987 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 322 336 - -
Stsc30351g00007 987 MobiDBLite consensus disorder prediction 689 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30351g00007 Stsc-Chr30351 37219 40182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30351g00007 4 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.921 4.41e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30351g00007 - - ahf:112741095 1103.58