Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30349g00012 ATGGAGAGCCAGAACCATCAACTCCACTTCTCTAATTCAGGGGAGCCCCTTAGAGGAGGAACATCTTTCTTCAAAACATGTTTCAATGGAATCAATGCCTTGTCAGGTGTTGGGATACTCTCAATGCCATATGCAGTGTCTCGAGGAGGGTGGCTTAGTTTAATCTTGCTCCTCATTGTTGCCATTGTTTGTTGCTACACAGGCTTGCTTCTTCAAAGGTGCATGGACGTACACCCATTAATCAAATCCTACCCTGACATAGGCGAGGTTGCTTTCGGTTACAAAGGAAGAGCTGTGGTAGCCATTTTCATGTACTTAGAGCTCTACTTAGTTGCTGTAGAGTTTCTCATACTAGAAGGTGACAATCTTGAGAAGTTGTTTCCAAATATGAGTTTCAAGATTGGTAGCCTTAGAATTGGAGGCAAAGCTGGTTTCATCATGCTAACTGTGCTGGCTATACTACCCACCACATGGTTGAGAAGTTTGGGAGTTCTGGCCTACATTTCTGTTGGTGGGGTTGTGGCTTCTGTTGTTTTGATTGTTTGTGTTGTGTGGGTTGCTGAAGTTGATGGAATTGGGTTTCATCAAAAGGGAGACATAATTCATTGGAAAGGCTTGCTTTCTAGTGTCAGCTTTTTTGCATTCTGTTATTGTGGACATCCAGTTTTTCCTACACTTCGCAATTCCATGAAGGATAAAATTCAATTTTACAAGGTTTTGATAGTATGCTTTATCATAAGCACTATAACCTATGGGTCCATGGCTATCATAGGGTACAAGATGTTTGGAGAATATGTGAATTCTCAAGTGACGTTAAATCTTCCAACAAACAAAATAAGCACCAAAATAGCAATTTACATCACTCTAATCAACCCTTTCACAAAGTATGCTGTTATAATCACCCCAATAGCCAATGCAATTGAAGAATCATTGCTTTTGCACAAGGGTCGTAGACCTATTACCATTCTCATAAGAACAACCATTGTGCTGACTACCTTGCTTGTGGCATTATTCGTTCCCTTTTTCGGCTACGTTATGGGGTTCATCGGCGCATTCTTGAGTGTGACATGTTCATGGATTTTACCATGTTTGTGCTATTTAAAGATGAACAAAGCAACTCAAAGATTTGGGATGGAGTTGGTTATGATCGTAGGAATTCTGTTTACAGGGTCAATTATTGCTATAGCTGGTACCTATATCTCTGTAATTCAGATAGTTAGACATATCAAGCTATAA 1236 0.4013 MESQNHQLHFSNSGEPLRGGTSFFKTCFNGINALSGVGILSMPYAVSRGGWLSLILLLIVAIVCCYTGLLLQRCMDVHPLIKSYPDIGEVAFGYKGRAVVAIFMYLELYLVAVEFLILEGDNLEKLFPNMSFKIGSLRIGGKAGFIMLTVLAILPTTWLRSLGVLAYISVGGVVASVVLIVCVVWVAEVDGIGFHQKGDIIHWKGLLSSVSFFAFCYCGHPVFPTLRNSMKDKIQFYKVLIVCFIISTITYGSMAIIGYKMFGEYVNSQVTLNLPTNKISTKIAIYITLINPFTKYAVIITPIANAIEESLLLHKGRRPITILIRTTIVLTTLLVALFVPFFGYVMGFIGAFLSVTCSWILPCLCYLKMNKATQRFGMELVMIVGILFTGSIIAIAGTYISVIQIVRHIKL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30349g00012 411 PANTHER OS05G0424000 PROTEIN-RELATED 30 392 - -
Stsc30349g00012 411 Pfam Transmembrane amino acid transporter protein 20 402 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30349g00012 Stsc-Chr30349 56874 58647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30349g00012 1 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 48.403 2.96e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30349g00012 K15015 - gmx:100812006 522.702