Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30348g00002 ATGAACTTCATGAAGAAGTGTAAGAGGGTATTGGGAAGCAACAGCAGCAGCGAGAGGATGATGATGTGTGGTGGCGAAGAGGAGAACAGTGGCAAGTATGGGAGATTATATTCAGAGAAGAATGATAAGAAGAAGAAGAAGACGACGGAAACTACTGCTCCACAGGGCTGTTTCTGTGTGTACGTAGGAGAAGAAAGGCAAAGGTTCGTGATGAAGATAAAGCACGCGAATCATCCATTGTTCAAGGCCTTGTTGGATGCTGCTGAAACCGAATACGGTTACAGAAACGATGGACCACTCTGCCTCCCTTGCGACGTTGACTTGTTCTGCGAGGCACTTGCTGAGATCCAGAATAACACCGCTTCTGTGGGTTGTGCTTTTCATCATCACACTAATAACGCACACTCTTCTCCTTCTTCGGTTTTCCAGAGTCCGTTGTCTTATCATTCTAATCACAGTTATTAG 465 0.4559 MNFMKKCKRVLGSNSSSERMMMCGGEEENSGKYGRLYSEKNDKKKKKTTETTAPQGCFCVYVGEERQRFVMKIKHANHPLFKALLDAAETEYGYRNDGPLCLPCDVDLFCEALAEIQNNTASVGCAFHHHTNNAHSSPSSVFQSPLSYHSNHSY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30348g00002 154 MobiDBLite consensus disorder prediction 135 154 - -
Stsc30348g00002 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 111 IPR003676 GO:0009733
Stsc30348g00002 154 Pfam Auxin responsive protein 35 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30348g00002 Stsc-Chr30348 18487 19277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30348g00002 51 116 Calmodulin-binding Proteins AT4G34750 48.485 1.38e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30348g00002 K14488 - gmx:102667331 134.42