Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30346g00011 ATGAGGAAGAGAATGGAATATAGAAAGGAAGAAAACAAAGTAATAGTTGTCATTGCTTATTATTCTTATCACGAAGTTGTCATTGATATGCATGCAGGTAAAAAATTATTTATTTGGTTTGGACCAAAACCGAGGGTGATTATTACAGATCCTGAGTTAATTAAAGATGCACTAAACAAGATTCATGACTTCCAAAAACCTCATTCAAATCCACTTCTTCGTTTGCTAGCTAGTGGTCTTGTCAGTTACGAGGGTGAGAAATGGAGCAGACATAGAAGAATAATCAATTCAGCATTCACTTCAGAAAACATCAAGAATATGATGCCAGCATTCTTGAAAAGTTGTACTGATATGATTAATAAATGGGAGGGAATGTTGTCTTCAGATGGATCATGTGAAATTGATGTTTGGCCTTTCCTTCAAGCTTTGACTAGTGATGTAATTTCTCGAGCTGCATTTGGAAGTAGTTACGAAGAAGGGATTAGAATATTTGATCTTCAGAAGGAGCAAGCTCAACTCGCAATGAAGGTTATGGTGAAAATTTACATCCCTGGATGGAGGTTTGTACCTACCAAAATCAACAGAAGGATGAAGGAGATCTATAGAGATATAAGAAATTCACTTAAAGTTATGATTAATAATAGAGAGAAAGCATTGAAGGCAGGTGAAGCTAACAAGAACAATGACTTGTTGGGCATACTTTTGGAATCAAATCATAAGGAAATTCATGATCATGGTGGAAACAAGAAGAACATTGGGATGAGTCTTGAAGATGTAATTGAAGAGTACTCTGATTGGCAAGCACGTGCAAGGGAGGAAGTCTTACAAGTCTTTGGAAATCAAACGCCTAACTTTGAGGGGTTGACTCATCTTAAAATTGTTACCATGATATTTTATGAGGTTCTAAGACTATACCCACCAGCAATTGGCCTTGTTCGACATACCCATAAAGATATTAAACTTGGGAACTTAACATTGCCGGCTGGAGTTCAACTTTCCTTGCCAATACTTTATGTTCATCATGATCCTCAACTTTGGGGTGACAATGCAAAGGAATTCAACCCTGCACGATTTTCTGAAGGAGTTTCAAAGGCAACAAATGGCAAAGTTTCTTTTTTTCCCTTCGGATGGGGTCCTAAAATATGCATTGGACAAAACTTTGCCATAGTTGAAGCAAAATTGGCTCTGTCTTCCATTTTACAAAATTTCTGGTTTGAACTTTCTCCGTCCTATACTCATGCTCCTGCCAATGTGATGACTCTTCAACCACAATATGGTGCTCATATCATTCTACACAAGGTGAAAAAAACTTGA 1314 0.3714 MRKRMEYRKEENKVIVVIAYYSYHEVVIDMHAGKKLFIWFGPKPRVIITDPELIKDALNKIHDFQKPHSNPLLRLLASGLVSYEGEKWSRHRRIINSAFTSENIKNMMPAFLKSCTDMINKWEGMLSSDGSCEIDVWPFLQALTSDVISRAAFGSSYEEGIRIFDLQKEQAQLAMKVMVKIYIPGWRFVPTKINRRMKEIYRDIRNSLKVMINNREKALKAGEANKNNDLLGILLESNHKEIHDHGGNKKNIGMSLEDVIEEYSDWQARAREEVLQVFGNQTPNFEGLTHLKIVTMIFYEVLRLYPPAIGLVRHTHKDIKLGNLTLPAGVQLSLPILYVHHDPQLWGDNAKEFNPARFSEGVSKATNGKVSFFPFGWGPKICIGQNFAIVEAKLALSSILQNFWFELSPSYTHAPANVMTLQPQYGAHIILHKVKKT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30346g00011 437 Gene3D Cytochrome P450 262 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS Group II E-class P450 signature 329 344 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS Group II E-class P450 signature 142 160 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS Group II E-class P450 signature 85 105 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 SUPERFAMILY Cytochrome P450 24 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS P450 superfamily signature 262 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 Pfam Cytochrome P450 263 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 Pfam Cytochrome P450 33 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 Gene3D Cytochrome P450 28 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00011 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Stsc30346g00011 437 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 427 - -
Stsc30346g00011 437 CDD CYP72 33 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30346g00011 Stsc-Chr30346 87170 89758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30346g00011 33 434 Cytochrome P450 AT3G14680 54.673 1.69e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30346g00011 - - aip:107613584 689.108