Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30346g00010 ATGAAATTACCCATCGGAACGGGTTTCATCAGAGATGGTCGATGGTTCGGGACTGCTCCTCCATTCATACTCCCTCGAGGCAGCTGTTACAATGAGAATTTGATTTGGGTGAACCAATTACTCAATCCAAGGGGTGATTGGAATCAACCATTGATTAATCACAATTTCGGACCCCCTGAAGCTGCTCGAATTCTTCAAATTCAGATAGGCCATTGCCTTTTCTCATGCCCAATAGCAATGGAAGTGTGGCAGAAACTTGGTCTCCATCTCATTCCCTCGCACCTGCAACTTCAACCCCCATGGAAATGGTTAGATGAAGGTTTTCAACAAATCCTTTCCAACTCTCACAATACCCACCTCATGTCCCGATTTGTCTTCACTCTGTGGACTCTGTGGTTAGCTCGGAACTTATTTGTCTTCGAAGGAACACCATCTTCGCCCGAGGATATTCTGTCTCGCGTAGGGAATTTATCCACTGAGTTTTTACCCACTCCTATCAACAGGAGGATGAAAAACATTGACAGACTTATAAAGGCTTCACTTAAGGATATAATTAATATAAAAGAGAAAGCTCTAAAAGCAGGTGAGACAAGTAAAGATGACTTATTAGGAATAATGTTGGAATCAAATCACAAGGAAATTGAAGAGCATGGACACAAGAAGAACATTGGAATGAGTCTTGAAGATGTAATTGATGAATGTACATTATTCTATTTTGCTGGGCAAGAAACAACTTCTGTTTTGCTTGTTTGGACAATGGTGTTACTAAGTAAGCATTCTTATTGGCAAGAAAGAGAAAAGGAGGAAGTCTTGCAGGTCTTTGGTTCTCAGAAACCACACCTTGATGGCTTAAATCGCCTTAAAATGGTCTCTATGATACTATATGAGGTTCTAAGGTTATATCCACCAGCACTTGGACTTACTCGAAGTACAGACAAAGAAATGAAACTTGGAGAACTAACATTGCTCGAAGGAGTTCATATTTACTTGCCAATTGTTTTGGTTCACCATGATATTGGACTTTGGGGTGAAGATGCAAAGCAATTTAACCCTGAAAGATTTTCTAAAGGAATTTTTAAGGCTACAAATGGAAAAGCTTCTTTCTTCCCATTTGGATGGGGTCCTAGAATCTGTACTGGACAAAACTTCTCCCTAATGGAAACAAAGTTGGCTTTATCATTGATTCTACAACATTTTCTTTTGAACTTTCTCCTTCTTATATTCATGCTCCGATGGCTATGGCTATGCTTCATCCACAACATGATGCTCATATCATTTTACGTAAGGTGA 1290 0.3977 MKLPIGTGFIRDGRWFGTAPPFILPRGSCYNENLIWVNQLLNPRGDWNQPLINHNFGPPEAARILQIQIGHCLFSCPIAMEVWQKLGLHLIPSHLQLQPPWKWLDEGFQQILSNSHNTHLMSRFVFTLWTLWLARNLFVFEGTPSSPEDILSRVGNLSTEFLPTPINRRMKNIDRLIKASLKDIINIKEKALKAGETSKDDLLGIMLESNHKEIEEHGHKKNIGMSLEDVIDECTLFYFAGQETTSVLLVWTMVLLSKHSYWQEREKEEVLQVFGSQKPHLDGLNRLKMVSMILYEVLRLYPPALGLTRSTDKEMKLGELTLLEGVHIYLPIVLVHHDIGLWGEDAKQFNPERFSKGIFKATNGKASFFPFGWGPRICTGQNFSLMETKLALSLILQHFLLNFLLLIFMLRWLWLCFIHNMMLISFYVR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30346g00010 429 Pfam Cytochrome P450 159 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 Gene3D Cytochrome P450 112 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PANTHER CYTOCHROME P450 FAMILY MEMBER 158 400 - -
Stsc30346g00010 429 SUPERFAMILY Cytochrome P450 159 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS E-class P450 group I signature 229 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS E-class P450 group I signature 249 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS P450 superfamily signature 292 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS P450 superfamily signature 240 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00010 429 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30346g00010 Stsc-Chr30346 77345 80743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30346g00010 161 399 Cytochrome P450 AT3G14690 60.669 9.24e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30346g00010 - K23809 gmx:100808323 356.295