Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30346g00006 ATGGAAGCAGCATGGGTCACAGCTGTTGCGGTGACAGCCATGATTGTTGCAGTGATATCGATATGGAGGGTGCTTAATTGGCTGTGGCTAACACCAAAGAAGCTTGAGAAACTGTTGAGAGAACAAGGCTTTCAAGGAAATCCGTACAGGATTCTGGTTGGGGATACTGAAGATATTCAGAAGATGCTAAAGCAATCTCAATCTAAACCCATGGATGTATCTGATGATGATATATTACAACGTTTCTTGTGCCATATCCAGCAAACTATAAACAGATACGCTAGTGGTCTTGTCGGTTACGAGGGTGAGAAATGGAGCAGGCATAGAAGAATAATCAATCCAGCATTTACTTCAGAAAACATCAAGATTATGATGCCAGCATTCTTGAAAAGTTGTACTGATATGATTAATAAATGGGAGGGAATGTTGTCTCCAGATGGATCATGTGAAATTGATGTTTGGCCTTTCCTTCAAGCTTTGACTAGTGATGTAATTTCTCGAGCTGCATTTGGAAGTAGTTACGAAGAAGGAATTAGAATATTTGATCTTCAGAAGGAGCAAGCTCGACTCGCAATGAAGGTTATGATGAAAACTTACATCCTTGGATGGAGGTTTGTACCTACCAAGATCAACAGAAGGATGAAGGAGATCGATAGAAATATAAGAAATTCACTTAAAGTGATGATCAATAACAGAGAGAAAGCATTGAAGGCAGGTGAAGCTAACAAAAACAATGACTTGTTGGGCATACTTTTGGAATCAAATCATAAGGAAATTCATGATCATGGTGGAAACAAGAAGAACATTGGGATGAGTCTTGAAGATGTAATTGAAGAGTGCAAACTATTCTATTTTGCTGGTGAAGAGACAACATCTACATTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACTCTGATTGGCAAGCACATGCAAGGGAGGAAGTCTTACAAGTTTTTGGAAATCAAACCCCTAACTTTGAGGGGTTGAGTCATCTTAAAATTGTTACCATGATATTTTATGAGGTTCTAAGATTATACCCACCAGTAATTGGTCTTGTTCGACATACTCACAAAGATATCAAACTTGGGAACTTAACATTGCCTGCTGGAGTTCAATTTTCCTTGCCAATACTTTATGTTCATCATGATCCTCAACTTTGGAGTGACAATGCAAAGGAATTTAACCCTGCACGATTTTCTGAAGGAGTTTCAAAGGCAACAAATGGCAAAGTTTCTTTTTTCCCCTTCGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTGCCATAGTTGAAGCAAAATTGGCCCTGTCTTCCATTTTACAAAATTTCTGGTTTGAACTTTCTCCATCCTATACTCATGCTCCTGCCAATGTGATTACTCTTCAACCACAATATGGTGCTCATATCATTCTACACAAGGTGCAAAAAACTTGA 1440 0.3875 MEAAWVTAVAVTAMIVAVISIWRVLNWLWLTPKKLEKLLREQGFQGNPYRILVGDTEDIQKMLKQSQSKPMDVSDDDILQRFLCHIQQTINRYASGLVGYEGEKWSRHRRIINPAFTSENIKIMMPAFLKSCTDMINKWEGMLSPDGSCEIDVWPFLQALTSDVISRAAFGSSYEEGIRIFDLQKEQARLAMKVMMKTYILGWRFVPTKINRRMKEIDRNIRNSLKVMINNREKALKAGEANKNNDLLGILLESNHKEIHDHGGNKKNIGMSLEDVIEECKLFYFAGEETTSTLLVWTMVLLSRYSDWQAHAREEVLQVFGNQTPNFEGLSHLKIVTMIFYEVLRLYPPVIGLVRHTHKDIKLGNLTLPAGVQFSLPILYVHHDPQLWSDNAKEFNPARFSEGVSKATNGKVSFFPFGWGPRICIGQNFAIVEAKLALSSILQNFWFELSPSYTHAPANVITLQPQYGAHIILHKVQKT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30346g00006 479 SUPERFAMILY Cytochrome P450 46 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Stsc30346g00006 479 Gene3D Cytochrome P450 25 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 469 - -
Stsc30346g00006 479 PRINTS E-class P450 group I signature 160 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 Pfam Cytochrome P450 50 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00006 479 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30346g00006 Stsc-Chr30346 32847 42220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30346g00006 6 476 Cytochrome P450 AT3G14690 52.124 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30346g00006 - K23808 aip:107613584 745.732