LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc30346g00003	ATGGAAGCTACTACTATTGTTCTTGGTGCAGCCACAATAGTTGTGTTGGTTTCATGGGGTTGGGGGATCCTGAACTGGCTATGGCTTAAGCCAAAGAAGCTAGATAGGTTGCTGAGAGAACAAGGTCTTCAAGGGACACCTTACAAGGTTCTAGTTGGAGACTCTAAAGATTTTATGAAGATGCAAAGAGATGCAAGAACCAAACCCATGAATACCTCTGATGATGATATTGTTCCTCGTACGCAGCCATATGTCTTGCAATGTTACAACAAATACGGTAAGAATTCATTTTTCTGGTTTGGGGGAATACCAAGGTTGATTGTTACAGATCCTGAGCTAATCAAAGATGTATTCAACAAGATCTATGATTTTCCAAAGCCAGATACAAATCCACTAATCAAGTTATTGGTTAATGGTCTTGCTGGGCATGAGGGTGAGAAGTGGAGCAAACATAGAAGAATAATCAACCCTGCATTTCACTTAGAAAAGTTAAAGCTTATGATACCAATATTCCTCAAAAGTAGCAATGACATGATAAGTAAATGGGAAAAGTTGTTGTCTCATAATGGATCATGTGAATTGGATGTGTGGCCTTTTTTTCAAAATTTGGCCAGCGATGTTATTTCTCGAGCAGCATTTGGAAGTAGTTATGAAGAAGGGATACGAATATTTGAGCTTCAGAAAGAGCAACTTAGACTTACAATGGAAATTATAATGAAAATCTACATTCCGGGATGGAGGTTTTTACCCACTCGTAACAATAGGAGGATGAAGGAAATTCATCGACTTATAAAAGCTTCACTTAAGGATATAATTAACAAGAAAGAAAAAGCACTAAAAGCAGGGGAGACAAGTAAAGATGACTTACTGGGAATACTGTTGGAATCAAATCACAAGGAAATTGAAGAGCATGGAAACAAGAAGAACATTGGAATGAGTCTTGAAGATGTAATTGATGAATGTAAATTGTTCTATTTTGCTGGGCAAGAGACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTACTCAGTAAGCATTCTTATTGGCAAGAAAGAGCAAGGGAGGAAGTCTTGCAAGTCTTTGGTACCCAGAAACCACACCTTGATGGCTTAAATCGCCTTAAGATTGTCACTATGATACTATATGAGGTCCTGAGGTTATATCCGCCAGTACTTGGACTTACTCGAAGTACAGACAAAGAAATGAAACTTGGAGAGTTAACATTACCCGAAGGAGTTCATATTTACTTGCCAATTGTTTTGGTTCATCATGATATTGGACTTTGGGGTGATGATGCAAAGCAATTCAATCCTGAAAGATTTTCTGAAGGGATTTTCAAAGCCACAAATGGCAAAGCCTCTTTCTTCCCATTTGGATGGGGTCCTAGAATCTGCATTGGACAAAACTTCTCCCTAATGGAAGCAAAGCTGGCTTTATCATTGATTCTACAACATTTTTCTTTTGAACTTTCTCCTTCTTATACTCATGCTCCGATGGTTATGGGTACGCTTCATCCACAACATGGTGCTCATATCGTTTTACGTAAAGTGAAAATATAA	1560	0.3821	MEATTIVLGAATIVVLVSWGWGILNWLWLKPKKLDRLLREQGLQGTPYKVLVGDSKDFMKMQRDARTKPMNTSDDDIVPRTQPYVLQCYNKYGKNSFFWFGGIPRLIVTDPELIKDVFNKIYDFPKPDTNPLIKLLVNGLAGHEGEKWSKHRRIINPAFHLEKLKLMIPIFLKSSNDMISKWEKLLSHNGSCELDVWPFFQNLASDVISRAAFGSSYEEGIRIFELQKEQLRLTMEIIMKIYIPGWRFLPTRNNRRMKEIHRLIKASLKDIINKKEKALKAGETSKDDLLGILLESNHKEIEEHGNKKNIGMSLEDVIDECKLFYFAGQETTSVLLVWTMVLLSKHSYWQERAREEVLQVFGTQKPHLDGLNRLKIVTMILYEVLRLYPPVLGLTRSTDKEMKLGELTLPEGVHIYLPIVLVHHDIGLWGDDAKQFNPERFSEGIFKATNGKASFFPFGWGPRICIGQNFSLMEAKLALSLILQHFSFELSPSYTHAPMVMGTLHPQHGAHIVLRKVKI	519

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc30346g00003	519	Gene3D	Cytochrome P450	28	518	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PANTHER	CYTOCHROME P450 FAMILY MEMBER	19	510	-	-
	Stsc30346g00003	519	SUPERFAMILY	Cytochrome P450	82	515	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	89	108	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	465	488	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	336	362	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	203	221	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	316	333	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	PRINTS	E-class P450 group I signature	455	465	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Stsc30346g00003	519	Pfam	Cytochrome P450	85	495	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc30346g00003	Stsc-Chr30346	8946	15680	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc30346g00003	1	517	Cytochrome P450	AT3G14690	57.803	0.0	628

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc30346g00003	-		K23809	gmx:100808323	780.785

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