Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30346g00003 ATGGAAGCTACTACTATTGTTCTTGGTGCAGCCACAATAGTTGTGTTGGTTTCATGGGGTTGGGGGATCCTGAACTGGCTATGGCTTAAGCCAAAGAAGCTAGATAGGTTGCTGAGAGAACAAGGTCTTCAAGGGACACCTTACAAGGTTCTAGTTGGAGACTCTAAAGATTTTATGAAGATGCAAAGAGATGCAAGAACCAAACCCATGAATACCTCTGATGATGATATTGTTCCTCGTACGCAGCCATATGTCTTGCAATGTTACAACAAATACGGTAAGAATTCATTTTTCTGGTTTGGGGGAATACCAAGGTTGATTGTTACAGATCCTGAGCTAATCAAAGATGTATTCAACAAGATCTATGATTTTCCAAAGCCAGATACAAATCCACTAATCAAGTTATTGGTTAATGGTCTTGCTGGGCATGAGGGTGAGAAGTGGAGCAAACATAGAAGAATAATCAACCCTGCATTTCACTTAGAAAAGTTAAAGCTTATGATACCAATATTCCTCAAAAGTAGCAATGACATGATAAGTAAATGGGAAAAGTTGTTGTCTCATAATGGATCATGTGAATTGGATGTGTGGCCTTTTTTTCAAAATTTGGCCAGCGATGTTATTTCTCGAGCAGCATTTGGAAGTAGTTATGAAGAAGGGATACGAATATTTGAGCTTCAGAAAGAGCAACTTAGACTTACAATGGAAATTATAATGAAAATCTACATTCCGGGATGGAGGTTTTTACCCACTCGTAACAATAGGAGGATGAAGGAAATTCATCGACTTATAAAAGCTTCACTTAAGGATATAATTAACAAGAAAGAAAAAGCACTAAAAGCAGGGGAGACAAGTAAAGATGACTTACTGGGAATACTGTTGGAATCAAATCACAAGGAAATTGAAGAGCATGGAAACAAGAAGAACATTGGAATGAGTCTTGAAGATGTAATTGATGAATGTAAATTGTTCTATTTTGCTGGGCAAGAGACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTACTCAGTAAGCATTCTTATTGGCAAGAAAGAGCAAGGGAGGAAGTCTTGCAAGTCTTTGGTACCCAGAAACCACACCTTGATGGCTTAAATCGCCTTAAGATTGTCACTATGATACTATATGAGGTCCTGAGGTTATATCCGCCAGTACTTGGACTTACTCGAAGTACAGACAAAGAAATGAAACTTGGAGAGTTAACATTACCCGAAGGAGTTCATATTTACTTGCCAATTGTTTTGGTTCATCATGATATTGGACTTTGGGGTGATGATGCAAAGCAATTCAATCCTGAAAGATTTTCTGAAGGGATTTTCAAAGCCACAAATGGCAAAGCCTCTTTCTTCCCATTTGGATGGGGTCCTAGAATCTGCATTGGACAAAACTTCTCCCTAATGGAAGCAAAGCTGGCTTTATCATTGATTCTACAACATTTTTCTTTTGAACTTTCTCCTTCTTATACTCATGCTCCGATGGTTATGGGTACGCTTCATCCACAACATGGTGCTCATATCGTTTTACGTAAAGTGAAAATATAA 1560 0.3821 MEATTIVLGAATIVVLVSWGWGILNWLWLKPKKLDRLLREQGLQGTPYKVLVGDSKDFMKMQRDARTKPMNTSDDDIVPRTQPYVLQCYNKYGKNSFFWFGGIPRLIVTDPELIKDVFNKIYDFPKPDTNPLIKLLVNGLAGHEGEKWSKHRRIINPAFHLEKLKLMIPIFLKSSNDMISKWEKLLSHNGSCELDVWPFFQNLASDVISRAAFGSSYEEGIRIFELQKEQLRLTMEIIMKIYIPGWRFLPTRNNRRMKEIHRLIKASLKDIINKKEKALKAGETSKDDLLGILLESNHKEIEEHGNKKNIGMSLEDVIDECKLFYFAGQETTSVLLVWTMVLLSKHSYWQERAREEVLQVFGTQKPHLDGLNRLKIVTMILYEVLRLYPPVLGLTRSTDKEMKLGELTLPEGVHIYLPIVLVHHDIGLWGDDAKQFNPERFSEGIFKATNGKASFFPFGWGPRICIGQNFSLMEAKLALSLILQHFSFELSPSYTHAPMVMGTLHPQHGAHIVLRKVKI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30346g00003 519 Gene3D Cytochrome P450 28 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 510 - -
Stsc30346g00003 519 SUPERFAMILY Cytochrome P450 82 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 Pfam Cytochrome P450 85 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Stsc30346g00003 519 FunFam Cytochrome P450 734A1 28 518 - -
Stsc30346g00003 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30346g00003 519 CDD CYP72 83 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30346g00003 Stsc-Chr30346 8946 15680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30346g00003 1 517 Cytochrome P450 AT3G14690 57.803 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30346g00003 - K23809 gmx:100808323 780.785