Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30343g00008 ATGCCCCTTTATCGTCGCAGGCACGTCGCTGGATTTCTAGCGCACAGGAGCCCGCAACCTGCTTCGTCTTCATTCTCAGGCGCCATCTACGTCCCCAGCCTCCTCCAGAAACTCATCACCCAGCAACACCGTTCTCCGTCGCCCTGCCTCGTGGAAAAACTCCGCCGCAATCGAAGGTACACCAAACTATCTTCTCCTCATTGTGCTTGCTTAGTTATGGGGGACTTTGATTTCACTATAGATGTGCATCATGGTGGAAGATTCATTGACATGGGACACAGTTTAGAGTATTCGGGAGGATTTGTGTTGGAAGACCTGTACTTTGAGCTTGATTCGTGGTCGTTGCAAGAAATAGTGACCATCGGAAAAACACACCACAAGAACCTTGTTCGCTTGCTGGGATTTTGTGCTGAGGGTCCTAAAAGGCTTCTGGTCTATGAATACATGAGCAATGGTTCCCTTGGGAAGCTTCTCTTTGGCAATGAAATGCTTCCATATTGGGATTTAATTGAAAACTCAAATACAGTGCAGGGACCTGATTGA 543 0.4788 MPLYRRRHVAGFLAHRSPQPASSSFSGAIYVPSLLQKLITQQHRSPSPCLVEKLRRNRRYTKLSSPHCACLVMGDFDFTIDVHHGGRFIDMGHSLEYSGGFVLEDLYFELDSWSLQEIVTIGKTHHKNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGNEMLPYWDLIENSNTVQGPD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30343g00008 180 Gene3D Phosphorylase Kinase; domain 1 108 150 - -
Stsc30343g00008 180 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 116 168 - -
Stsc30343g00008 180 SUPERFAMILY Protein kinase-like (PK-like) 113 164 IPR011009 -
Stsc30343g00008 180 Pfam Protein tyrosine and serine/threonine kinase 115 161 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30343g00008 Stsc-Chr30343 53823 54820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30343g00008 111 166 Receptor kinase-like Gene Family AT4G21400 51.786 5.80e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc30343g00008 PK_Tyr_Ser-Thr 6.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30343g00008 - - adu:107470047 98.5969