Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30342g00008 ATGTACAACGACTTGAACTCATTTGGGAAAACATTTGAAGGAAAAGATCAAGATCACTATGGAATCTCATTTGACAATGTTCTAGGGCTCTATGACTGTGATGACTCCTCCATTTGCAAATCAGATTGTGAAACAATAGACCTACCTGGGTGTGATGGAAGTGGAGGCAACAATGGTGGTGGATCCCTTGGATGCTGTTATCCACTGAGTGATCATAGCATATGGCAGAGTGGAGAAGGATTCTCAGTGTTCTCTGAATTTGGATGCAGAGGGTTCTCTAGTTGGGCTGTTGTTAGAGGTTCAAATTCAGGAAAACATGGAGTGAAGTTGGAATGGGGTGTTCCTTTGAAGAAGAATTCATCATCAATGGAGAAAGTTTGTGCTGTGAATGCAGATATGGTGAATGCTACTTCAGTTGAAGGTGCAGTTAGGTGTCTTTGTCAAGATGGATTTCTTGGTGATGGTTTTCTTAATGGATCAGGATGCTTGCAATCTTGTATCAAGAATGGACAAGAAGCATATGGAGACAACTGTTACATCAAAAGACATGATCAAAGGAAAATGCTCATCATTGTAGGAATCCTTGGTCCAGTTCTCATTGTTGCTTCACTGATTGCCCTCTTCTATCTTCTAAAAAAACCAGCAACAAAGCCAGGGATGTTTGACACAGAACAGGCCTATTACCACAGCATTTCGTTCCGAAAACCGTATCGAACTCGCCTATTCACCCACCATGATCTAGACAAAGCCACCAAAGGTTTTGAAGAAGGACAGAAGCTTATGCATGGAACAAACGGCTCGATTTTCGCCGGAGTCCTCGGCGACGGATCCCACGTAGCAGTTCACAGGCTAAAATGTGAGAATGAGAAGGACATAATCCAAGTTCTATCACAAATTGAGATTCTATCAAACATTGTGCACAGGAACATGGCCTGTGTTCTTGGATGCTGCATTGAATCTAGTTACACTCCTCTAGTGGTTTATGAGTACCCTGCCAATGGAACATTAGAGGAGCATTTGAATCATCAATTCAAAGGAAATGGGATTGGTTTGGATTGGTACAGAAGATTGATCATAGCTGCTGAAACTTCTTGCTTTCTTGCATTCTTGCACTATGAGAATTCCCCTCCAATTTTCCACAACAATCTCAAGACTAGCTCTATCTTCTTGGACGATGATCTCTCGGTCAAGATCGCCGGGTTCGGCCTACTCAATTCTAAATTCAGCTACCAAAACGAGCGCGAATGCCTCCGGTTTTGCAAGAATGATGTCTATGACATGGGTATTCTCCTTCTGGAGATCATCTCAGGCTCAAGCTCGGCTCACCAGAAGCCCTCGCCAACCTCGGCGTTGGAGAAAATAAGGGATGGGAAGCTAGAAGAGATTGTTGACCCTCTCCTCTCGTATCACGAGATGCCGAATTTTCGAAGAGAACAAGTGCAGATTGTTGCAGACCTTGCAACAAGGTGTTTGCTGTTTGGTGCAGATGGGAAGCTTGGAATGGTTGATGTTGTGAGAGAATTAACACACATAACAAAACAGAGTCCTGATGCTGGGAATCTGCATGTGAAGGTGCCTGCATTGGAGGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATTTCAATGTCTCCTGATTCTATGATCATCCATTGA 1656 0.4318 MYNDLNSFGKTFEGKDQDHYGISFDNVLGLYDCDDSSICKSDCETIDLPGCDGSGGNNGGGSLGCCYPLSDHSIWQSGEGFSVFSEFGCRGFSSWAVVRGSNSGKHGVKLEWGVPLKKNSSSMEKVCAVNADMVNATSVEGAVRCLCQDGFLGDGFLNGSGCLQSCIKNGQEAYGDNCYIKRHDQRKMLIIVGILGPVLIVASLIALFYLLKKPATKPGMFDTEQAYYHSISFRKPYRTRLFTHHDLDKATKGFEEGQKLMHGTNGSIFAGVLGDGSHVAVHRLKCENEKDIIQVLSQIEILSNIVHRNMACVLGCCIESSYTPLVVYEYPANGTLEEHLNHQFKGNGIGLDWYRRLIIAAETSCFLAFLHYENSPPIFHNNLKTSSIFLDDDLSVKIAGFGLLNSKFSYQNERECLRFCKNDVYDMGILLLEIISGSSSAHQKPSPTSALEKIRDGKLEEIVDPLLSYHEMPNFRREQVQIVADLATRCLLFGADGKLGMVDVVRELTHITKQSPDAGNLHVKVPALEETFSNSSLLQMISMSPDSMIIH 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30342g00008 551 Gene3D Phosphorylase Kinase; domain 1 227 330 - -
Stsc30342g00008 551 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 106 548 IPR044652 GO:0004672
Stsc30342g00008 551 SUPERFAMILY Protein kinase-like (PK-like) 233 508 IPR011009 -
Stsc30342g00008 551 ProSiteProfiles Protein kinase domain profile. 254 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30342g00008 551 Pfam Protein tyrosine and serine/threonine kinase 256 458 IPR001245 GO:0004672|GO:0006468
Stsc30342g00008 551 Gene3D Transferase(Phosphotransferase) domain 1 332 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30342g00008 Stsc-Chr30342 71640 74931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30342g00008 126 511 Receptor kinase-like Gene Family AT2G23450 32.057 5.95e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Stsc30342g00008 PK_Tyr_Ser-Thr 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30342g00008 - - gmx:100779880 746.117