Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30339g00010 ATGGGTTTCACCCAAGGAACCTACACTGATTCCAGTGACATTTCCATTGCCCCAAATGTTCCCTTTCCTCCTCCTTCATCTTCCTCCTCCTCTCTCCTTGCACATCACTACTGTGACCACAACAACCTCAAATTTAGAAACTTTCTGAGAAAAATGATCTGGGACTTTGGTTTTTCATGTCTTTCCGACCCCTCTTCTTCTCCTCCTCCTTCGTCCTCTTCTTCTTCTTCGCGTAGGAGGAGGAACAGCTGCAAAGATGATGAATGCAGCAACAAGAAGGGTAATTTGGAGCACAACAAGGCTTGGCTTCTTGCTGAGTCTGGTGGCTGTGGAGCTGAACTGTTGAACAATGCAGAGCCTCAATCGGTTCACTCTTCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGTTGGAGTCCCTCAACATGACTTCTTCAAGTGCTGCAACGGTTCTCATGGTCAATTTGGACAATGGTATGAGTGAATCACGCGCCAGAGAGATCAAGTGGAGGAGGATTGAGTCTTTGGAGAAGAGCATTTCCCCAGTTGCACACTCTTTGATCAGATTCACCTATGCTGAAATACTCTCTGCTACCCGCAATTTCTCCAAAGGTAGAGTGTTGGGGAGAGGGGCTTTGAGCTGTGTTTTTAGAGGGAGAGTTGGGATTTTGAGAACTGTGGTGGCTATAAAACGGTTGGATAAAGAAGATAAGGAGTCTGCAAAGGCATTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCAAACGTGGTTCCCCTTGTTGGTTTTTGTATTGACCCGGAGGAGGGTTTGTTCTTGGTGTACAAGTATGTCTCAGGTGGCAGCTTGGAGCGGCACTTACATGGGAGGAAGAAGGGTGGGAAGGGTAGTTCATCACTTCCATGGTCTGTGAGGTACAAAGTTGCCATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAACATTCTGCTTTCTTCTAGGAAGACTCCCAAGTTATGTGATTTCGGGTTAGCTACTTGGACTACGGCTCCATCGGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTTGGAGTTGTTCTGTTGGAGCTTATAACTGGTCGGAAACCAATCGAAGCCAAAAGGTCTCAGGGAGAGGAGAACTTGGTCCTATGGGCTAAGCCTTTTCTACAGAAAGGGAAAGGAGCCATTGATGAGTTGCTTGATCCTCAACTCAAGAACAGTTTGAGATTCTCAAATCAAATCGCTCGGGTGATCGAAGCAGCAGCTGCATGTGTCACAAACGAGGAATCTCGGAGGCCCGGCATACACGAGATTATCGCGATACTGAAAGGTGAAGAAGAACCTCTTTTCTCTAAAAGAAAGAAATCCGGTTTTCTTGGGAATGGATGTGTGATTGATTGTTATTCTCAGCTAGAACAAAAAAATCATGAGATGAAAAGTCATTTGGCTTTGGCAATGCTAGGAGTTTCGGAGTTTGAGGACGAGGATTATCTTTATGGTCGTTAA 1623 0.4486 MGFTQGTYTDSSDISIAPNVPFPPPSSSSSSLLAHHYCDHNNLKFRNFLRKMIWDFGFSCLSDPSSSPPPSSSSSSSRRRRNSCKDDECSNKKGNLEHNKAWLLAESGGCGAELLNNAEPQSVHSSFRFSFCSQVELESLNMTSSSAATVLMVNLDNGMSESRAREIKWRRIESLEKSISPVAHSLIRFTYAEILSATRNFSKGRVLGRGALSCVFRGRVGILRTVVAIKRLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGGKGSSSLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSRKTPKLCDFGLATWTTAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRSQGEENLVLWAKPFLQKGKGAIDELLDPQLKNSLRFSNQIARVIEAAAACVTNEESRRPGIHEIIAILKGEEEPLFSKRKKSGFLGNGCVIDCYSQLEQKNHEMKSHLALAMLGVSEFEDEDYLYGR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30339g00010 540 ProSiteProfiles Protein kinase domain profile. 201 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30339g00010 540 Gene3D Phosphorylase Kinase; domain 1 185 278 - -
Stsc30339g00010 540 PANTHER OS08G0249100 PROTEIN 83 495 IPR046958 -
Stsc30339g00010 540 SUPERFAMILY Protein kinase-like (PK-like) 181 481 IPR011009 -
Stsc30339g00010 540 Gene3D Transferase(Phosphotransferase) domain 1 279 495 - -
Stsc30339g00010 540 MobiDBLite consensus disorder prediction 1 21 - -
Stsc30339g00010 540 MobiDBLite consensus disorder prediction 1 16 - -
Stsc30339g00010 540 Pfam Protein kinase domain 202 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30339g00010 540 FunFam probable serine/threonine-protein kinase PBL7 162 278 - -
Stsc30339g00010 540 SMART serkin_6 201 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30339g00010 540 FunFam Putative receptor-like serine/threonine-protein kinase 279 497 - -
Stsc30339g00010 540 MobiDBLite consensus disorder prediction 62 90 - -
Stsc30339g00010 540 MobiDBLite consensus disorder prediction 62 78 - -
Stsc30339g00010 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30339g00010 Stsc-Chr30339 52017 54673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30339g00010 189 484 Trihelix Transcription Factor Family AT1G70460 42.617 2.26e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc30339g00010 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30339g00010 - - adu:107481060 968.378