Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30338g00004 ATGGCCAAACAAGAAAAACCAAAACCTGGAGGGTGTTTCTCTGGATTCTTGCGTGTGATCCTATGTGCTGGAACTGGAACTAGTCCTCCAGTTCATCCATCTCAAGATGAATCTGAAAATGTGCATTCAAATTTGAAACAAAATGATGCATTGATCCATGAAGATTTTGATGCTACCCCTGGATTGGTGGCAAGGCTAATGGGGTTGGATTCAATTCCGAACACCAACTGTTTGATGAAAGGACACTCCCCAGATTCAGTTCTAAGGAGTAGGTCAGTGAATTTTGTGGACTACTTGCTAAATTTCGATGTGGGCCAAGAAAGTTTCCACCGCCGGGCCAAGACTTCGGCCTCGTTCCGGGAGGTTCCAGCGTCGGCATTGGCTCATATTCAACAAAAACAAGATCATGATCTTGTTGTGTTTCATCATTGGGATTGCAATGTGGTTAAGGATCATGAAGCTCGACGCGAATCGAGGAAGTATGAACCGGGGTTGACGAAAGAATCGAAACAGGGGAAGAAACATAGCAAGGAAACAGGGGAAAGGAATCAAAGGAAGAACAAGAAGATTTCAAAGCTGAAGAATGAGCCTAGAAGGGTTCCTTCTAATTCTAACAAGAATGGAAGAAAGGTTAGAATGCAAAATGAAGATAAAGATTGTTCTAGTGTCTCTTCATGCTCTTCCAAGAGTTATGGTTATAGATATAGTAGTGATGGTAATGGTGATTGCTGTTCAACCTCTCCATTGTTGCAAAGCAAGTATAAGAAAGAGTTTGTTGTTGAATCAAACCTCAAGAACAAGATGAGGAAGAAGAAATCACCAAAGAAGATAGAGAGTGATTGTGACTCGGAAAATCTCAGTCCAATTTCAGTTCTAGATGTCAATGATTGTCATTCCCTCAATGGAACTATAGATGCTACACTACCCTTGGCTTCAAACCCAAAGTGGAAATCTTCACCATTAAGATCCTCAAAAGATGGAATTGAAGACACAAGAACTAACAAAAATGGTGGTGCTTATGCCAACATTGACATCAATGGAGAAGAAGTAGAATATTACTCGGAACTATTTTTGAAACTTTGCACAATGATAGAAAAGGATATAAAAGAGTTAGATTGTACAACAAAGCATGTTCATGAGGATTTTGAGGATATCTGTTTGGTCTTTGAGCACAAAATTTTGGATCTTTTACTACACGAACTTGTCAATGATGTTGTAGAACTTTCATGTTGA 1233 0.3966 MAKQEKPKPGGCFSGFLRVILCAGTGTSPPVHPSQDESENVHSNLKQNDALIHEDFDATPGLVARLMGLDSIPNTNCLMKGHSPDSVLRSRSVNFVDYLLNFDVGQESFHRRAKTSASFREVPASALAHIQQKQDHDLVVFHHWDCNVVKDHEARRESRKYEPGLTKESKQGKKHSKETGERNQRKNKKISKLKNEPRRVPSNSNKNGRKVRMQNEDKDCSSVSSCSSKSYGYRYSSDGNGDCCSTSPLLQSKYKKEFVVESNLKNKMRKKKSPKKIESDCDSENLSPISVLDVNDCHSLNGTIDATLPLASNPKWKSSPLRSSKDGIEDTRTNKNGGAYANIDINGEEVEYYSELFLKLCTMIEKDIKELDCTTKHVHEDFEDICLVFEHKILDLLLHELVNDVVELSC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30338g00004 410 PANTHER OS05G0128300 PROTEIN 1 409 - -
Stsc30338g00004 410 Pfam DUF761-associated sequence motif 59 76 IPR032795 -
Stsc30338g00004 410 MobiDBLite consensus disorder prediction 152 228 - -
Stsc30338g00004 410 Coils Coil 176 196 - -
Stsc30338g00004 410 MobiDBLite consensus disorder prediction 152 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30338g00004 Stsc-Chr30338 33246 35214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30338g00004 1 405 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.054 8.13e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30338g00004 - - gmx:102668485 293.893