Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30337g00013 ATGGAGTCTTCTCCTGCCTTCTTTCTCATATTCTCTTTCATTATACCTGTCTTCATCTTCATCATCAAATTCAAACTCCTCAAATCAAAGAAGCCTAGGCTCCCACCAGGCCCTAAACCATGGCCTATAGTCGGTAACCTCCCTGAAATGCTTGCTAACAAACCCACATTCAGATGGATTCAAAACATCATGAATGATCTTAACACCGAAATCACATGCATCCGTCTAGGTAACATTCATGTCATCCTGGTGACAAGCCCTTCCATTGCACGTGAATTTTTACTGAAACAAGATGCGATTTTCGCATCAAGGCCGTTGAATTGGTCTAGTAAGTATGTCTCATCAGGATACTTAACCGCAACTATAGCACCCTATGGAGAACAATGGAAGAAAATGAAGAGAGTCATGGTTGAGGAATTGATTTCGCCCCAAAGGCATCAATGGCTGCATGACAAAAGGGTGGAAGAAGCCGACAACATTGTCCGTTATGTGTATAACCAAATCAAGAATAATGGTAACGGCCTTGTGGATTTGAGGCATGTAGGGCAACACTATGTTGGAAACTTGATTAGGAGGTTGCTCTTCAACAAGAGGTACTTTGGTAATGGTAGTGAAGATGGTGGTCCTGGTGCTGAGGAATTGGAGTACGTTGAAGCACTCTTCCTTGTGTTAAAGCATCTTTTTGCGTTTTCTATTTCTGATTATCTTCCATGGTTGAGGTGGCTTGATTTTGAAGGTCATAACAAAATAATAAAGGAAGCTACTAACACCATAAGGAAGTACCATGATCCAATCATTGAAGAAAGGATTCATGAGTGGAGGAATGGGACAAGGACACATCAAGAGGATTGGCTTGATGTTCTTATCTCCTTGAAGGATGCAAACAACAATCCATTTTTGACTATGGAGGAAATCAAAAGTCAAATTATGGAAATTACAGTTGGAGCAATAGATAATCCATATAATAATGTTGAATGGATACTTTCTGAAATGATGAATCAACCAGAAATACTTGAAAAGGCCACTGAAGAACTGGAGAGCGTGGTAGGAAAAGAGAGATTAGTACAAGAATCTGATATTCCAAAGCTCAACTATGTGAAGGCATGTATAAGAGAAGGTTTTCGCCTTCATCCAATTGCAGACTTCAATGTTCCTCATGTCTCAATAGAAGACACAATTGTTTCCAATTATTTCATCCCAAAAGGTAGCCATATTCTTATTAGGAGGCAAGGTATTGGCCAAAATCCAAGAGTTTGGGAAGAACCCTTGAAGTTTAAACCTGGAAGACATTTGAAGAAAGATGGATTTCGTGTGAGTTTGGGTGAGCCAAGCTTGGAGTTGTTCACATTTGGGATTGGAAGACGAAACTGCCCTGCAGTGACACTTGGGTCTACAATGACAATTATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGATTCCTCCTCCCAATGAACCAATCATTGATCTCTCTGAACTTGAGAGGGGCACCACAAAAGCTAAGCCACTGGTTGTACTGGGAAAGCCAAGATTACCGGTGGAAGTTTATCATCAAATGAATTAA 1566 0.4055 MESSPAFFLIFSFIIPVFIFIIKFKLLKSKKPRLPPGPKPWPIVGNLPEMLANKPTFRWIQNIMNDLNTEITCIRLGNIHVILVTSPSIAREFLLKQDAIFASRPLNWSSKYVSSGYLTATIAPYGEQWKKMKRVMVEELISPQRHQWLHDKRVEEADNIVRYVYNQIKNNGNGLVDLRHVGQHYVGNLIRRLLFNKRYFGNGSEDGGPGAEELEYVEALFLVLKHLFAFSISDYLPWLRWLDFEGHNKIIKEATNTIRKYHDPIIEERIHEWRNGTRTHQEDWLDVLISLKDANNNPFLTMEEIKSQIMEITVGAIDNPYNNVEWILSEMMNQPEILEKATEELESVVGKERLVQESDIPKLNYVKACIREGFRLHPIADFNVPHVSIEDTIVSNYFIPKGSHILIRRQGIGQNPRVWEEPLKFKPGRHLKKDGFRVSLGEPSLELFTFGIGRRNCPAVTLGSTMTIMLFARLVHGFTWIPPPNEPIIDLSELERGTTKAKPLVVLGKPRLPVEVYHQMN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30337g00013 521 SUPERFAMILY Cytochrome P450 35 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 FunFam Cytochrome P450 9 27 515 - -
Stsc30337g00013 521 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 Gene3D Cytochrome P450 27 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PRINTS P450 superfamily signature 333 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30337g00013 521 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 11 518 - -
Stsc30337g00013 521 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30337g00013 Stsc-Chr30337 91376 95995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30337g00013 1 517 Cytochrome P450 AT5G05260 51.601 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30337g00013 - K12153 gmx:100809902 642.114