Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30337g00009 ATGGCTGAAGACAACAAAAATGTGGTATTGTTGGATTTCTGGCCAAGCTCTTATGGGATAAGGGTGAAAATTGCTTTGCAAGAAAAGGGTGTCTCATATGAGTGTAGGCAAGAAGATTTTGATGCTAAAAGTTCTCTGCTTTCGGAGATGAACCCAGTTCACAAAATGATCCCAGTTTTGATTCATAATGGTAAACCCATTTGTGAATCTCTCAACATAGTTGAGTACATTGATGAGGTTTGGAACCATAAAAAAACTTCTCTACTTCCCTCTGATCCTCACAAGAGATCCCAAGCAAGGTTTTGGGGCAATTACATTGATAAAAATGTATACAGCAAAGGAAAGAAAGTATGGAATGGGAAGGTGGAAGAGAAAGAAGAGAACCAGAAGCAGTTCATAGAATGCTTGAAGATCTTGGAGGAAGAGCTTGGTGACAAGCCATATTTTGGAGGTGATGAATTTGGGTATGTTGATGTAGCTCTTGTTCCCTTCACAAGCTGGTTTTATACATATGAGACATTAGGGAACCTAAGCATAGAGGCATTTGTTCCAAAGCTTGTAAGATGGACCAAAAGGTGCATGGAAAAAGAGAGTGTGGCTAAATCACTACCTCACCCTCATAAGATATATGGCTTTGCTTTGGAATATAGAGAGAAACATGGACATGACTAA 672 0.3929 MAEDNKNVVLLDFWPSSYGIRVKIALQEKGVSYECRQEDFDAKSSLLSEMNPVHKMIPVLIHNGKPICESLNIVEYIDEVWNHKKTSLLPSDPHKRSQARFWGNYIDKNVYSKGKKVWNGKVEEKEENQKQFIECLKILEEELGDKPYFGGDEFGYVDVALVPFTSWFYTYETLGNLSIEAFVPKLVRWTKRCMEKESVAKSLPHPHKIYGFALEYREKHGHD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30337g00009 223 SUPERFAMILY GST C-terminal domain-like 79 220 IPR036282 -
Stsc30337g00009 223 CDD GST_N_Tau 8 81 - -
Stsc30337g00009 223 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Stsc30337g00009 223 SFLD Main (cytGST) 5 220 - -
Stsc30337g00009 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 210 IPR045073 -
Stsc30337g00009 223 Pfam Glutathione S-transferase, C-terminal domain 124 192 - -
Stsc30337g00009 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc30337g00009 223 Pfam Glutathione S-transferase, N-terminal domain 9 79 IPR004045 -
Stsc30337g00009 223 Gene3D - 92 223 - -
Stsc30337g00009 223 FunFam Glutathione S-transferase U20 92 223 - -
Stsc30337g00009 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 212 IPR010987 -
Stsc30337g00009 223 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Stsc30337g00009 223 Gene3D Glutaredoxin 1 91 - -
Stsc30337g00009 223 Coils Coil 122 142 - -
Stsc30337g00009 223 CDD GST_C_Tau 93 216 IPR045074 GO:0004364|GO:0006749
Stsc30337g00009 223 FunFam Tau class glutathione S-transferase 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30337g00009 Stsc-Chr30337 55381 56311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30337g00009 9 220 Glutathione S-transferase Gene Family AT1G78370 58.962 4.70e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30337g00009 K00799 - gmx:100527221 367.081