Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30337g00006 ATGAAAGTTGGCCTCATCGCGCAGCCCCCATTCTCAACCAACTTCCTCAATCTCTTCTCCCAAACCCCCATCGCCGAGAAATCCGTCATCGCCGCCCCTTTCCCTTTCCGGACCGTTGTTGACGGTTCCCTTGACGGCGGAAGGCACCGTATTTGGCCCCTGCGCTGCTCGTCCGTGAAGAAGCCGCATCTCTCCGTCGTCCGTGCTGGAAGCCCATCCCCACCGTCGCTGCGCCTCCGCCTCGCCGTGTCTTCACCGTTCAACTACAGGGGACGTCTTCTGCGTGACCATCGGCCTTCGTCAACGGAGCTGCTGCTGTCATCGTCGCGAGTCTCGACTGCCACCTTCTCCAAGACGCCATTGCCATCAACACCGAACCAGGTTTCTGATCCTGAGAGGAATACCTTGCAACTAGGAGAGCTATGGATGTTGTTGGGATCAATTCTAATGAGCACGTGTGATGAGAATGCCCTTGAGGACTCACTTTGCAAACGTGTTATGGTCACTCGTGGCGACACAATAACAAAGTCACTTGATCCCGTTGCTGCTGCTCTCAGCAGAGATGCATTGGCTAAAAAAGGAGTTAATTGTGCTTGTTGTCAGCCATGA 609 0.5484 MKVGLIAQPPFSTNFLNLFSQTPIAEKSVIAAPFPFRTVVDGSLDGGRHRIWPLRCSSVKKPHLSVVRAGSPSPPSLRLRLAVSSPFNYRGRLLRDHRPSSTELLLSSSRVSTATFSKTPLPSTPNQVSDPERNTLQLGELWMLLGSILMSTCDENALEDSLCKRVMVTRGDTITKSLDPVAAALSRDALAKKGVNCACCQP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30337g00006 202 Gene3D Myosin VI head, motor domain, U50 subdomain 112 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30337g00006 Stsc-Chr30337 33459 34453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30337g00006 152 192 Myosins gene family AT5G43900 80.488 1.68e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30337g00006 K10357 - vum:124822995 74.7146