Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30337g00002 ATGGCTTTCTTGCTTGCTGAACTTGGTACAAGTGGCTCTTTGGATGGACAGCAAAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTCATTTGCTTTGGATGCAAAAGTCCTGACACAATACTTTCTAAGGAGAATCGTCAGTTCTTCCTTCGATGCGAGAAGTGTGGATCCCGAAGATTAGTTGCTCCGATCAAGACCCGTTTCATGGCTCATGTCGTGTTGGCCGCAGGAATGCCGCCGGCACATAATTTGACATGA 300 0.4467 MAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICFGCKSPDTILSKENRQFFLRCEKCGSRRLVAPIKTRFMAHVVLAAGMPPAHNLT 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30337g00002 99 SMART eIF2Bneu4 1 72 IPR002735 GO:0003743|GO:0006413
Stsc30337g00002 99 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 83 IPR045196 GO:0003743|GO:0006413
Stsc30337g00002 99 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 42 77 IPR016190 GO:0003743|GO:0006413
Stsc30337g00002 99 FunFam Eukaryotic translation initiation factor 2 subunit 1 78 - -
Stsc30337g00002 99 Gene3D - 1 78 - -
Stsc30337g00002 99 Pfam Domain found in IF2B/IF5 1 72 IPR002735 GO:0003743|GO:0006413
Stsc30337g00002 99 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 1 45 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30337g00002 Stsc-Chr30337 12839 13570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30337g00002 1 86 Eukaryotic Initiation Factors Gene Family AT5G20920 87.209 1.18e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30337g00002 K03238 - jre:109002409 158.303