Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30335g00010 ATGGAGGTGATTATTAGAAGGAAAAGCCTCAAGTCTTTGGTGACAAAGGTTGTTAAAGGTCTTGCATTCTTGGCCCTAAGTAGGAGAAGGGCTTATCCCATTTGTGACATCGACGACGACGATGAAGGCCGCAACGACGAAGAAGTTGCTACATCGGCGCTGGAAGGGCATTTTGCGGTTATAGCGATGAAAGGTGGTGATGACGAAGAAGAAGAGAAGAGGAGGTTCATGGTTGAGTTGGATTATTTGAATGATCCTGCGTTTTTGAAGCTTCTGGAGATGGCTAAGGAAGAATATGGATTTCAACACAAAGGTGCTCTTGCTCTTCCATGCACACCTCAACAACTTGGCAACATTTTACACAATCATCATCATTTGTAA 381 0.4383 MEVIIRRKSLKSLVTKVVKGLAFLALSRRRAYPICDIDDDDEGRNDEEVATSALEGHFAVIAMKGGDDEEEEKRRFMVELDYLNDPAFLKLLEMAKEEYGFQHKGALALPCTPQQLGNILHNHHHL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30335g00010 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 116 IPR003676 GO:0009733
Stsc30335g00010 126 Pfam Auxin responsive protein 47 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30335g00010 Stsc-Chr30335 71821 72221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30335g00010 43 111 Calmodulin-binding Proteins AT4G34750 37.681 5.70e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30335g00010 - K14488 gmx:102661602 113.235