Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30332g00017 ATGTCATCAGTTACAAGATCTGTAGTAACGGACCATGACGATGATGAAGAAGAAGAAGAAAGTTCTGCTGCGTGCATCTGTGGTAGTTTTATGTCTAAGGGGTTCAAGAGAAACCAAGTGTTGGATTACAGCAGCGAGATAGAAGAAGAAGAAGGGGACCAAGATTATTACTATTCAGATGGATTTTTTGAGATCAAGCTCATGAAGGAGGCTTTGGATACCATACCGGAATCAGAAGAAGATGAGATAAGCACTGTGTTTTCTCTTGATTTTCACAAATGTGACGAGGAGGAGGAAGAGAACTTGGTTTATGTGGCAGTTGGAGAGGGTGATTCAAGCATGCAGGTGCTATCATGGGCGTTGAAGAACACCGTCACACCTTCCACCACCACCCTGTATCTCATACACGTTTTCCCTGTCATCAAGTTCATTCCAAGTCCACTTGGAAAAATTCCAAGGAGCCATGTGAAGTTAGAGTATGTTAACCACTACTTGACTCAAGAGAAAGACAAGAGGAAATTGCTGCTTAAGAAATTCATTGACCTCTGCATTCTTTACAAGGTTAAGGTGGAGATGGTGCTGATAGAGGGCGACAAGGTTGCTGAAGCCATTGTGGATCTTGTTGGGAAACTTGATATAAGGAAACTGGTAATTGGGACAAACACATCTTATTTAAGAGGAAAATCAAGGAGTGGTGGCATAGCGGACAAGGTACTCAAGAATGCACAGGAAACCTGTGATGTTAAAATCATATGCCAAGGAAGGGAAGTGATGGACAAAATGATTATGAGAAACTCAAACTCATCACGCTCCACAGACAGCACCACCAACTCACAGTCACAGGATGAAGATGAACCCCGCAGCAGCATCGTCCCTCCTCTGCGTTTTGTGCCAAATCCCATTCCTACTTGGTTATTTAGGCCTCGATTTTTGTCACCCAATGACATGACCAAACATTAA 960 0.4302 MSSVTRSVVTDHDDDEEEEESSAACICGSFMSKGFKRNQVLDYSSEIEEEEGDQDYYYSDGFFEIKLMKEALDTIPESEEDEISTVFSLDFHKCDEEEEENLVYVAVGEGDSSMQVLSWALKNTVTPSTTTLYLIHVFPVIKFIPSPLGKIPRSHVKLEYVNHYLTQEKDKRKLLLKKFIDLCILYKVKVEMVLIEGDKVAEAIVDLVGKLDIRKLVIGTNTSYLRGKSRSGGIADKVLKNAQETCDVKIICQGREVMDKMIMRNSNSSRSTDSTTNSQSQDEDEPRSSIVPPLRFVPNPIPTWLFRPRFLSPNDMTKH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30332g00017 319 MobiDBLite consensus disorder prediction 1 21 - -
Stsc30332g00017 319 Gene3D HUPs 95 261 IPR014729 -
Stsc30332g00017 319 MobiDBLite consensus disorder prediction 263 286 - -
Stsc30332g00017 319 Pfam Universal stress protein family 104 243 IPR006016 -
Stsc30332g00017 319 MobiDBLite consensus disorder prediction 263 294 - -
Stsc30332g00017 319 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 34 283 - -
Stsc30332g00017 319 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 105 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30332g00017 Stsc-Chr30332 78070 79399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30332g00017 103 255 U-box Gene Family AT4G25160 29.677 5.92e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30332g00017 - - gmx:100799795 263.077