Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30330g00010 ATGATGGTTGGGCTTTTCAGTATATTGGGGCATGAGAAATGTGAAAGCTACTTAATTTTCAGTGGAGAGGCTTCTCTTGGTGACAGTGTTAGAACTTTTCTGTATTTTCTTGGTCTTGCATATTGCTTCCTTGGATTATCAGCTATAACAGCTCGTTTCTTCAAGTCCATGGAAAATGTAGTCAAGCATACTAGGAAGGTTGTGGAGATAGATCCTGTAACTCAGACTGAAGTAGTTAGGCATGAGAAAGTTTGGAATTATACCATTGCTGATATTAGCCTATTAGCCTTTGGAACTAGCTTTCCTCAGATATCGTTGGCCACCATTGATGCTATAAGAAATGTGGGGAACTTGTATGCTGGAGGTTTGGGACCAGGAACACTCGTCGGTTCTGCAGCATTTGACCTTTTCCCTATCCATGCTGTCTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAAAAGATTGCTGACATAGGAGTCTGGTTGGTGGAGTTGTTTTGGTCATTTTGGGCTTATATTTGGTTATACATTATTTTGAAGGTATGGACTCCAGATGTGGTGACTCTATGGGAGGCCTTGTTGACAGTACTGCAGTATGGATTACTGTTGACCCATGCTTATGCTCAAGACAAGCGCTGGCCATATATTTCTCTACCTATTGAAAGGGATGAGAGGCCTGAGGAATGGGTGCCAGAAGAGTCTCCTTATTTTGCAAAAGAAGGCCATGACAAAATGGACTGTTCTGAGATATGTCCCATGAGTGAAGAACATGGGGAGACTGTTGATATTTTCTCCATTCATTCAGTAAATCCCACTGACCAAAGATATGAAAGGGTACCTCAAATAGATGATAATGTTGCTCAAGTTTCTGGTAAAGCTAAGGAAGTGATGACAGAGGATGTTCATTTGCTTAAAATTTGGAGGCAGCAATTTGTGGATGCACTGACGTTGGAGAGCCTGGAAGCAAAAAAACTGAATAACGCCTATCTCCGCATGGGTAGAATTTTATGGCAATTACTGCTTTTACCATGGAGGTTTCTGTTTGCTTTTGTTCCTCCATGCTATATAGCTCATGGATGGATCTCCTTCATTTGCTCTTTGCTTTTCATCAGTGGAATAGCTTACATTGTTACTAGGATCACTGACCTTATAAGTTGTGTCACAGGAATAAATGCTTATGTCATAGCGTTTACAGCACTGGCCAGTGGAACTTCATGGCCCGATTTAGTGGCAAGCAAGATTGCCGCTGAACGTCAAATAACTGCAGACTCAGCAATTGCAAACATCACTTGCAGCAATTCAGTGAACATATACGTTGGAATTGGTGTTCCATGGCTTATTGATACCTTTTACAACTTCATAGCATATAGAGAACCTCTTCGGATCCAAGATGCAGGGGGGCTAAGTTTTTCATTGCTTGTTTTCTTCTCTACTTCTGTTGGGTGTATATCGGTTTTGGTTTTACGGCGTTTAATTTTTGGCGCGGAGCTAGGAGGACCAAGGCTCTGGGCATGGATCACTTGTGTGTACTTCATGCTTCTGTGGATTATTTTTGTTGTGCTATCATCACTCAAAGTTTCTGGGTTCATTTAG 1593 0.4168 MMVGLFSILGHEKCESYLIFSGEASLGDSVRTFLYFLGLAYCFLGLSAITARFFKSMENVVKHTRKVVEIDPVTQTEVVRHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNVGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADIGVWLVELFWSFWAYIWLYIILKVWTPDVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIERDERPEEWVPEESPYFAKEGHDKMDCSEICPMSEEHGETVDIFSIHSVNPTDQRYERVPQIDDNVAQVSGKAKEVMTEDVHLLKIWRQQFVDALTLESLEAKKLNNAYLRMGRILWQLLLLPWRFLFAFVPPCYIAHGWISFICSLLFISGIAYIVTRITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGVPWLIDTFYNFIAYREPLRIQDAGGLSFSLLVFFSTSVGCISVLVLRRLIFGAELGGPRLWAWITCVYFMLLWIIFVVLSSLKVSGFI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30330g00010 530 Gene3D - 87 222 IPR044880 -
Stsc30330g00010 530 Gene3D - 320 524 IPR044880 -
Stsc30330g00010 530 PANTHER SODIUM/CALCIUM EXCHANGER 13 243 - -
Stsc30330g00010 530 Pfam Sodium/calcium exchanger protein 35 207 IPR004837 GO:0016020|GO:0055085
Stsc30330g00010 530 Pfam Sodium/calcium exchanger protein 359 522 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30330g00010 Stsc-Chr30330 53107 56873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30330g00010 8 530 Antiporters AT2G47600 72.538 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30330g00010 K03452 K05849 gmx:100792839 884.789