Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30326g00020 ATGGGAGCATTGTCACACAAATGGTTGAGAATTATTCGAAGCAAGTTCCTACTAATAAGATCATCCAACAAAGACATTACTCTACCTTACACAAGAAGAAACCAAATTGAAGAAGAAGAAGAAACCACCACCATTGAAGACTATCTCAATTCATCAGCCATTGATGATAATAAGGAAGATCTTGCAGCAATCAAGATCCAAGCTTATTTTAGGGGTCATCTTGCAAGAAGAGCATATAGAGGTCTAAGAAGCATTGTGAAGGTGCAAGCATTGGTGCGTGGTGTTTTTGTGAGGAAACAATCACATATTGCTATGCAATGTATGCATGCAATTCTTCGTTTGCAAATTAGGGTTCGTGCAAGACAGCTTCATCTCCTTGGAGCCTTTGATAATTGA 396 0.3864 MGALSHKWLRIIRSKFLLIRSSNKDITLPYTRRNQIEEEEETTTIEDYLNSSAIDDNKEDLAAIKIQAYFRGHLARRAYRGLRSIVKVQALVRGVFVRKQSHIAMQCMHAILRLQIRVRARQLHLLGAFDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30326g00020 131 ProSiteProfiles IQ motif profile. 83 110 IPR000048 GO:0005515
Stsc30326g00020 131 ProSiteProfiles IQ motif profile. 59 87 IPR000048 GO:0005515
Stsc30326g00020 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 102 IPR027417 -
Stsc30326g00020 131 Gene3D - 56 110 - -
Stsc30326g00020 131 SMART iq_5 58 80 IPR000048 GO:0005515
Stsc30326g00020 131 SMART iq_5 82 102 IPR000048 GO:0005515
Stsc30326g00020 131 PANTHER IQ-DOMAIN 5-RELATED 33 123 - -
Stsc30326g00020 131 Pfam IQ calmodulin-binding motif 83 100 IPR000048 GO:0005515
Stsc30326g00020 131 Pfam IQ calmodulin-binding motif 62 80 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30326g00020 Stsc-Chr30326 103353 104343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30326g00020 22 123 IQD Protein Family AT3G51380 50.980 4.08e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30326g00020 - - ccaj:109793784 136.732