Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30326g00011 ATGCTATCAAAATTTATGGACTTCCTGGTTGCCTGCTGGCGGCGACGATCATCGCCGGACCGAAAGGGCTCCGATGTTTCCGGCGGGCGGAAGGAGGGTTTGCTGTGGTACAAGGATTGTGGGCAGCATCTTTTTGGTGAATTCTCTATGGCTGTGGTTCAGGCCAACAACTTGCTTGAGGATCAGAGCCAGGTTGAGTCTGGTCCCTTAAGCTTGCTTGACACTGGCCCTTATGGTACTTTTGTTGGTGTTTACGATGGTCATGGCGGACCTGAGACGTCGCGTTACATTTGTGATAATCTATTCCAGCATCTAAAAAGATTTGCATCTGAGCATAAGTCTATGTCTGTGGAGGTCATTCGGAAGGCGTACCAAGCCACAGAAGAGGGTTTTCTGTCTGTGGTCACTAAACAGTGGCCTATGAATCCTCAAATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGCGATTCCCTCTATGTTGCTAACCTCGGGGATTCTCGTGTCGTGCTTGGGAGGGTTGTCAGGGCAACTGGGGAGGTTCTGGCAATCCAGCTGTCATCGGAGCATAATGTGAGTATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGACTCGAAAATTGTGGTTTTGAAGCATAACGTATGGCGAGTGAAGGGCCTGATACAGGTCTCTAGATCCATTGGTGATGTATACCTTAAAAAGTCTGAGTTTAACAAGGAACCGTTGTATGCTAAGTTTCGTCTTCGGGAAACTTTCAAAAGACCAATTTTGAGCTCTGAACCATCAATTTCTGTTCATGAACTTCAAGAGCATGATCAATTTCTCATATTTGCTTCTGATGGTCTTTGGGAACACCTAAGTAACCAGGATGCTGTTGATATAGTTCAAAATCATCCACACAATGGAATCGCTCGGAAGCTCATCAAAGCTGCTCTGCAGGAAGCTGCCAAGAAACGAGAGATGAGGTACTCCGACCTGAAGAAAATCGACCGTGGTGTCCGGCGGCATTTCCACGACGACATCACGGTTGTAGTTGTATTTCTTGACTCCAATCTCGTCAGCCGAGCCAGCACAGTACAGGGTCCTCCGATATCCGTGAGGGGAGGGGGTGTTCCCCTACCTTCTAGAACCTTGGCTCCATGCGCCGAACTCGGTTCGAGCTGA 1185 0.481 MLSKFMDFLVACWRRRSSPDRKGSDVSGGRKEGLLWYKDCGQHLFGEFSMAVVQANNLLEDQSQVESGPLSLLDTGPYGTFVGVYDGHGGPETSRYICDNLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKQWPMNPQIAAVGSCCLVGVICGDSLYVANLGDSRVVLGRVVRATGEVLAIQLSSEHNVSIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKSEFNKEPLYAKFRLRETFKRPILSSEPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHNGIARKLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASTVQGPPISVRGGGVPLPSRTLAPCAELGSS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30326g00011 394 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Stsc30326g00011 394 SMART PP2C_4 37 353 IPR001932 -
Stsc30326g00011 394 FunFam Phosphatase 2C family protein 36 365 - -
Stsc30326g00011 394 CDD PP2Cc 45 355 IPR001932 -
Stsc30326g00011 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Stsc30326g00011 394 Gene3D - 36 366 IPR036457 -
Stsc30326g00011 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Stsc30326g00011 394 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Stsc30326g00011 394 PANTHER PROTEIN PHOSPHATASE 30 353 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30326g00011 Stsc-Chr30326 57157 62071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30326g00011 1 383 PP2C-type Phosphatase Gene Family AT3G51370 76.562 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30326g00011 K01102 - gmx:100777920 723.005