Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30324g00009 ATGAAGATTTTATTCTCATCTTTGGATGATGATGGTACTGACATCGAAAATTCGTCGGGGAGTGCCAAACACCCTGGCTTGGCGAAGGGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGCAGGATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCACAAACAATTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGAGTGATGAGAGAAGAAGCTTGGAAGCGGCAAGAGATGGAGAGAATAAGGAAGGACGAAGAGGCCAGAAACCAAGAGAGGTCGCGAAACTTAGCCCTCATATCTGTCATCGAAAACCTGCTTGGCCATGAGATTCAAATCCCGCAACCGGCAGAGGTAAGCCGCAAAGGAGAAGAGGATGGACTCCGACACAGAAGTGAGGAAGCGAATGCTCAAAAGAGTCTCGGCGTCAGTGGTGAGGCAAATAACAACAGGTGGCCAGATGTTGAAGTTCAATCACTCATAAACTTGAGAACTTCAATGGAGCAGAAATTTCTTCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCCGAAGCAATGAATAAGATAGGATACAACCGTTCTGCGAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGGTTGGGAGCGGCAAGAAACGGCGTCAAAATAGTAAAACCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCCTGGAAACCCCTTAAGCAGTAGTACCAATGATGTATCCAAGATTGCAAAGGAGGAAAGTGAAACTTGA 813 0.444 MKILFSSLDDDGTDIENSSGSAKHPGLAKGKRKMERRLEDFVQDMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKRQEMERIRKDEEARNQERSRNLALISVIENLLGHEIQIPQPAEVSRKGEEDGLRHRSEEANAQKSLGVSGEANNNRWPDVEVQSLINLRTSMEQKFLLMGSKVSIWEEISEAMNKIGYNRSAKKCKEKWENINKYYKRTVGSGKKRRQNSKTCPYFNELDVLYSNGLLNPGNPLSSSTNDVSKIAKEESET 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30324g00009 270 MobiDBLite consensus disorder prediction 123 140 - -
Stsc30324g00009 270 MobiDBLite consensus disorder prediction 1 33 - -
Stsc30324g00009 270 ProSiteProfiles Myb-like domain profile. 148 212 IPR001005 -
Stsc30324g00009 270 CDD GT1 154 218 - -
Stsc30324g00009 270 FunFam Trihelix transcription factor GT-2 156 217 - -
Stsc30324g00009 270 Gene3D - 156 217 - -
Stsc30324g00009 270 PANTHER FI21293P1 17 260 - -
Stsc30324g00009 270 SMART sant 152 214 IPR001005 -
Stsc30324g00009 270 Pfam Myb/SANT-like DNA-binding domain 154 240 IPR044822 -
Stsc30324g00009 270 Coils Coil 50 70 - -
Stsc30324g00009 270 MobiDBLite consensus disorder prediction 119 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30324g00009 Stsc-Chr30324 59005 60303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30324g00009 30 242 Trihelix Transcription Factor Family AT5G47660 44.395 3.38e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc30324g00009 Myb_DNA-bind_4 3.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30324g00009 - - adu:107482818 457.218