Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30322g00001 ATGGCAACTCATCAATTGAATCCCATGTTCAAAACATCCATGGTCAAGAATTACAAGACACAACAACAACAACAACCAAGAACACCAAGGTTCCATGTCTTCAACAATGTAAAAACAACATCTTCAACCACCACCACCACCATGAGTGGCAGGAAGCTCATAGAATCAGGCACAGTGAAAGCCATATTTCCTAAAGAAGCTTCAAGTGCCATGAACTCTGACGGGTTTATTCTCCTTGATGTTAGGCCAACATGGGAGGCAGAGAAGGCACGTGTTGTTGGGTCTGTGCACGTGCCAATCTTTGTTGAAGACACAGATAACAGCCCTGTAACATTGCTTAAGAAATGGGTGCATTTGGGTTATATTGGATTATGGACTGGTCAATATCTAACTACATTGAACCCTGAGTTTGTTGGTCAAGTTGAAGTGGCTATTCCTGATAAGGCTTCCAAGGTGCTTGTGGCTTGTGGAGAGGGATTAAGATCATTGACAGCAGCTTCAAAGTTGTACAATGGAGGTTACAGAAATCTGGGATGGTTAGCCGGAGGCTTCAGCCGATCAAAGGACGATGACTTTCCGGTGATCGAAGGAACAGAGAAGTTGCAGTATGCTACAATTGGAGGAGTCTCTTACTACTTTCTTCAGTTGCTTATACTTCTAAAAGCAGTGGGCAAATGA 678 0.4336 MATHQLNPMFKTSMVKNYKTQQQQQPRTPRFHVFNNVKTTSSTTTTTMSGRKLIESGTVKAIFPKEASSAMNSDGFILLDVRPTWEAEKARVVGSVHVPIFVEDTDNSPVTLLKKWVHLGYIGLWTGQYLTTLNPEFVGQVEVAIPDKASKVLVACGEGLRSLTAASKLYNGGYRNLGWLAGGFSRSKDDDFPVIEGTEKLQYATIGGVSYYFLQLLILLKAVGK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30322g00001 225 Pfam Rhodanese-like domain 64 186 IPR001763 -
Stsc30322g00001 225 SMART rhod_4 62 193 IPR001763 -
Stsc30322g00001 225 ProSiteProfiles Rhodanese domain profile. 72 196 IPR001763 -
Stsc30322g00001 225 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 55 197 IPR036873 -
Stsc30322g00001 225 CDD RHOD 66 185 - -
Stsc30322g00001 225 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 18 224 IPR044614 -
Stsc30322g00001 225 FunFam Rhodanese-like domain-containing protein 10 59 203 - -
Stsc30322g00001 225 Gene3D - 59 204 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30322g00001 Stsc-Chr30322 13685 15496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30322g00001 5 212 Sulfurtransferasese or Rhodanese AT3G08920 57.212 3.79e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30322g00001 - - gmx:100795945 307.375