Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30316g00012 ATGACGCCGCCAGGTGGCGTTGCCTGTATCGTAGTGAGCCTGGCAGGGTGGCATCTCTTTCTCTCAAGTTTCGGGAATGACGCGAACAGCAAGAAGGAAGGGAAGAGACTCCTATCAACGGTGACAGAGGTGTTTAACCCGCTTCCTCAAGCCAAGGCGGTTGACGTGCCCCAGAGCAAGCGGTTGACGCACCCCAAGGCTAGCGGTGAACGATGGTGGAGCTTGCCGAAGCATGGTGGAAGGCATGAGGTGGGTGGCAACCATTTGTATGGTGTTTCTCTTCTCTTCAGGTGCCGGCATGAGAAGGGAAAGCGTAACCCTAATTTTGAGTTGGGTTCTAAGAGAGCACTTCATGATTGGAGCGATGAAGAATGCTTGAAGATATTGAAGAATTGCCACAAGGCTATACCCAATGATGGGAAGGTCATTGTGATGAACATGGTCATTCCCATTGTGCCTGAGCCAACGTACAGCTATTGTCAAATACTCTTTTAG 495 0.5071 MTPPGGVACIVVSLAGWHLFLSSFGNDANSKKEGKRLLSTVTEVFNPLPQAKAVDVPQSKRLTHPKASGERWWSLPKHGGRHEVGGNHLYGVSLLFRCRHEKGKRNPNFELGSKRALHDWSDEECLKILKNCHKAIPNDGKVIVMNMVIPIVPEPTYSYCQILF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30316g00012 164 PANTHER O-METHYLTRANSFERASE 114 154 IPR016461 GO:0008168
Stsc30316g00012 164 Pfam O-methyltransferase domain 114 154 IPR001077 GO:0008171
Stsc30316g00012 164 Gene3D Vaccinia Virus protein VP39 114 156 IPR029063 -
Stsc30316g00012 164 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 157 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30316g00012 Stsc-Chr30316 90028 91035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30316g00012 114 150 Monolignol Biosynthesis Gene Families AT1G76790 70.270 5.21e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30316g00012 K13066 - gmx:100789402 70.4774