Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30315g00005 ATGGGAAGCATGATAAAGGAGTGCACGGAGCAAATGATAGAGAGATGGCTTACCCAAATTAATTCCGGCAACCGCGAAATCGATGTCGAAAAGGAGATCATAGCCACAGCAGGAGAGATCATAGCAACAACAAGCTTTGGCATGAAAGATGAAAAAGCAAGGGAAATATGTGACAAGCTAAGAGAATTACAAATGATACTTTTCAAGACAACAAGATATGTTGGTGTCCCATTTGGCAAATGGTTCAACACAAAGAAAACCCTAGAAGCAAGGAAACTTGGGAAGGAGATTGACAAGCTCTTGTTAAATGTCATAACTAACCGCAAGAATAATAATAATTCAAACAACAAAGAAAATAAGGGTAGTCAAGAAGATTTGCTAGGGTTGTTGCTTGAAGCTAATAGAAAAGTTGATGGGAAATTTGGGAAGACATTGAGCACAAGAGAACTTGTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAGACAACTGCATTGGCAATTTCTTGGACTTTGTTTTTATTGGCTGTTCATGAAGATTGGCAAATCCAATTAAGAGATGAGATAAGAGAATTGGCGGGTGATAACAAAGAGATTGATATCAATGTCCTTTCTGGCTTGAAAAAGATGAAATGGGTAATGAATGAAGCTGTGAGGCTTTATCCACCAGCACCAAATGTTCAAAGGCAAGCAAAAGAGGACATTAAAGTTGATAACAATTTTACAGTGCCAAATGGGACAAACATATGGATTGATGTTGTGGGAATGAACCATGATCCAACACTATGGGGAGATGATGTGAATGAGTTTAGGCCAGAGAGGTTCATAGATGATGTCAATGGTGGATGCAATCACAAAATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGAAGGAACTTGTCTTTCATGGAGTATAAGATTGTGTTAACCCTACTTCTCTCTAGGTTTAGGTTTAAACTCTCACCAAGTTATCAACATTCTCCAGCTATCATGCTATCACTTAGGCCTACTCATGGACTTCCTCTCATAGTTGAAACCCTTTAA 1059 0.3909 MGSMIKECTEQMIERWLTQINSGNREIDVEKEIIATAGEIIATTSFGMKDEKAREICDKLRELQMILFKTTRYVGVPFGKWFNTKKTLEARKLGKEIDKLLLNVITNRKNNNNSNNKENKGSQEDLLGLLLEANRKVDGKFGKTLSTRELVDECKTFFFAGHETTALAISWTLFLLAVHEDWQIQLRDEIRELAGDNKEIDINVLSGLKKMKWVMNEAVRLYPPAPNVQRQAKEDIKVDNNFTVPNGTNIWIDVVGMNHDPTLWGDDVNEFRPERFIDDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFRFKLSPSYQHSPAIMLSLRPTHGLPLIVETL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30315g00005 352 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 293 302 IPR017972 GO:0005506|GO:0016705
Stsc30315g00005 352 SUPERFAMILY Cytochrome P450 3 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS E-class P450 group I signature 254 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS E-class P450 group I signature 300 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS E-class P450 group I signature 290 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 344 - -
Stsc30315g00005 352 Gene3D Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS P450 superfamily signature 291 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 PRINTS P450 superfamily signature 213 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30315g00005 352 Pfam Cytochrome P450 3 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30315g00005 Stsc-Chr30315 39648 42315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30315g00005 1 352 Cytochrome P450 AT5G52400 59.375 2.85e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30315g00005 - - gmx:100785284 526.939