Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30314g00006 ATGGCACTTTCTTCTTCATCTTCTTCTTTGTTTCTTCTATTTGTTCTTGTTCTTCTTGCAGGAACCTATTCTTCTTCATCAGCTCATCAACTTTCAGAGAATTTCTATGCCAAGAAATGTCCACAAGTTTTCAGTGCTGTGAAATCTGTTGTTAAATCTGCTGTGGCCAAAGAACAACGCATTGGAGCTTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTGTTGATGGTTGTGATGGATCATTGTTATTGGATGATACACCAACATTCAAAGGAGAGAAAACAGCAGCAGCAAACAACAACTCAGTGAGAGGCTTTGAAGTAATTGATGCCATTAAAACAAAGGTTGAAGCTTTGTGCCCCGGTGTCGTTTCATGTGCTGATATCTTAGCCATTGCTTCTCGTGACTCTGTTGTTCTTCTTGGAGGGCCTTTCTGGGATGTGAAACTTGGAAGAAGGGATTCAAGAACTGCAAATTTCACAGCTGCTAACACTGGTGTCATTCCACCTCCAACTTCTAATCTTAGTAGTTTAATCTCCAATTTTAAGTCACATGGCCTTAGTGTCAAGGACTTAGTTGCCTTATCTGGATCTCACACAATTGGGCAAGCAAGGTGTACAAGTTTCAGAGGTCACATATACAATGACACAGACATAGACCCTTCATTTGCTAAGTTAAGGCAGAAAAATTGTCCAAGGCAAAGTGGCACAGGAGACAGCAATTTAGCACCCTTAGACCTACAAACTCCCACACATTTTGAGAACAACTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCACTTGTTCAGACCTATAGCAAGAACAATAAGGCCTTTACTTCTGACTTTGTCACTGGTATGATTAAGATGGGGGACATCCTGCCCTTAACTGGGTCAAAAGGTGAGATAAGGAAGAATTGCAGAAGGATGAATTAG 981 0.4088 MALSSSSSSLFLLFVLVLLAGTYSSSSAHQLSENFYAKKCPQVFSAVKSVVKSAVAKEQRIGASILRLFFHDCFVDGCDGSLLLDDTPTFKGEKTAAANNNSVRGFEVIDAIKTKVEALCPGVVSCADILAIASRDSVVLLGGPFWDVKLGRRDSRTANFTAANTGVIPPPTSNLSSLISNFKSHGLSVKDLVALSGSHTIGQARCTSFRGHIYNDTDIDPSFAKLRQKNCPRQSGTGDSNLAPLDLQTPTHFENNYYKNLINKKGLLHSDQELFNGGSTDSLVQTYSKNNKAFTSDFVTGMIKMGDILPLTGSKGEIRKNCRRMN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30314g00006 326 ProSiteProfiles Plant heme peroxidase family profile. 30 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 SUPERFAMILY Heme-dependent peroxidases 30 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Stsc30314g00006 326 PANTHER PEROXIDASE 72-RELATED 28 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30314g00006 326 Gene3D Peroxidase, domain 2 169 305 - -
Stsc30314g00006 326 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Stsc30314g00006 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Stsc30314g00006 326 FunFam Peroxidase 169 305 - -
Stsc30314g00006 326 Gene3D - 34 323 - -
Stsc30314g00006 326 FunFam Peroxidase 34 181 - -
Stsc30314g00006 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30314g00006 Stsc-Chr30314 53373 58000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30314g00006 30 326 Peroxidase AT5G05340 66.667 9.10e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30314g00006 K00430 - gmx:100813384 478.404