Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30313g00007 ATGCGGGTACACCATCGATTGAAGAAGCTTGATAAGGATTCTAAGAAAAACAGAGATCTTCTAGGAGCTTATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTATGTCATTCAAGAATGTGGCATTGGAGGAAGTTCCAGGGTCATCAATTTTAAAAGCTTTGGCAAGTCTTACTCAAAAACAAGGATTTTCTTCTCTTCCACAGTATTATGTTAGGGCTGGTTCTGCCCTTTTGGATATTGTCGAATCCAGGCCTTCAAGCTTTCCTATATCTTCCCAAGAGTTGTTCAGTATACTTGATGATTCCAGTGAAAAAACATTTTTGTGTGGAACAGCGGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACTAGTTTCTTGGTAGAGCAGAAATTGGTGAAGGCATGGCTTGCAGACAAAGAAGCTGAAGCATTGAAGTGTCAGAAGCAGCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGATTAGACAAAAAGAACAGAAGGGGAGGGAACTACTTGAAGATGACACTGAAATTAAAGGGAACATCAATAGCACAGCAGAGGCTGTACTATCTGCAGAAGCATCTTTGGTTACGTGTGTTTTTGAAGCACTCAATCATGATACATTTGCAGATCATTCTTCTTCACCACATGCAGCCGCCTGTAACTTTCCAGACATTTATGAAGGTGCTGACAGCGATACACAGTCAGGGTATGAATGTGGCACTGATCAAAATATTGAGCAACAGACATCCCAAGGACATAGTCGCCGGCCCATGATGGTTGCGAGACGGCAAGGACTTCCAAAATCACAGTGGGCAAGCCCATATTCTCAATTATCAAAACATGGAGTCATTCAGAAATATGGGACAAACCGTGATCAAAGAGCAACTTCTATTACTAATGGGATGAAAGTATGGAGTCGAAAGCCTAAACCAGAAATTGATGGGATGGGTTCAAAAGCCAGACTGCTGAAAGAACCAGACAAGCGTAAGAATCATGAAGTTTTGATAGGATCTATATCTGTTACTCTAGGCAATTGCAGCCAATCAATGGGTAGCCTTGTGCCATCTCATGGTGATGATATGGTGGAGAATCCAAGAAAGCAGAATACTGCACAGGAGAAGCCAATGAAATCTGATTATTTTGAGAGTGGCAACAACCGATTAACAGTGAAGCTGTGGCGGCCAGTTGGCCAACATAGAACCAAAGACCCGTCTCCACTTCAAAATGGTAGGGCTGGAGCTGAAGCTTATGAAAAAGAGGATCAAAATTTGTCAGGTCAAAGTAGTTTAAAGGTGTATAATATAGATCATAGTGATATTGATTTCAGGAACAAGTTTCCCAATCTTGGTGCTAAAGCAGATCCAAGAAGCCTTTTCTCCAGCCATGCTGCCAAAGTCTTTCTTGCAGAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTGTTTCACCTGATTCTGAACCTNNNNNNNNNNGTTCCAAGAGGTACAAGATAGTGAAGTGGCAGCATGTCAATTTTCCAATGCTGATAGATATAGCACTGCTGCAAATGCAGTGTGTCAATTGCATGCTACCTCCGGAGTTACTAAATCCAAAACCAAAATGA 1704 0.4143 MRVHHRLKKLDKDSKKNRDLLGAYWDKLSIEEAKEVMSFKNVALEEVPGSSILKALASLTQKQGFSSLPQYYVRAGSALLDIVESRPSSFPISSQELFSILDDSSEKTFLCGTAVSMQRYVFDGEAGKIGLEPKNLVACTSFLVEQKLVKAWLADKEAEALKCQKQLVEEEEAAQKRQAEILERKRQKKIRQKEQKGRELLEDDTEIKGNINSTAEAVLSAEASLVTCVFEALNHDTFADHSSSPHAAACNFPDIYEGADSDTQSGYECGTDQNIEQQTSQGHSRRPMMVARRQGLPKSQWASPYSQLSKHGVIQKYGTNRDQRATSITNGMKVWSRKPKPEIDGMGSKARLLKEPDKRKNHEVLIGSISVTLGNCSQSMGSLVPSHGDDMVENPRKQNTAQEKPMKSDYFESGNNRLTVKLWRPVGQHRTKDPSPLQNGRAGAEAYEKEDQNLSGQSSLKVYNIDHSDIDFRNKFPNLGAKADPRSLFSSHAAKVFLAERWKEAISSNHVKLVVSPDSEPXXXXSKRYKIVKWQHVNFPMLIDIALLQMQCVNCMLPPELLNPKPK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30313g00007 567 MobiDBLite consensus disorder prediction 426 449 - -
Stsc30313g00007 567 MobiDBLite consensus disorder prediction 380 402 - -
Stsc30313g00007 567 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 524 - -
Stsc30313g00007 567 Coils Coil 153 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30313g00007 Stsc-Chr30313 32629 36874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30313g00007 2 520 C2H2 Transcription Factor Family AT4G25610 41.698 1.26e-98 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30313g00007 - - gmx:100799153 682.945