Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30313g00001 ATGAAGGTGTTGGTAGCTTTGGTGTTGTTATGTGTGGTGAGAGTAGTGGCGGCGGGTCAATGGCGTGTTGGCTCCGAAGATAATAATGAAGAAGAAGAAGAAGAAGAGAGGAGGCTTGTGGTGAGCATGACTCTCGTTAAGAACGCTCGTGCTAGCGGTGCTCTCTGTTTGGATGGGACTTTACCGGCTTATCACTTGCATAGGGGATTTGGAGCTGGAATCAATAACTGGCTTCTACAATTCGAGGTAACTTTTCTTTCTTTTCCTACCACTTCAATTCCAATTCTTTTACCACAAAAGAATGCTAATGTGCCATAA 318 0.4434 MKVLVALVLLCVVRVVAAGQWRVGSEDNNEEEEEEERRLVVSMTLVKNARASGALCLDGTLPAYHLHRGFGAGINNWLLQFEVTFLSFPTTSIPILLPQKNANVP 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30313g00001 105 Pfam Pectinacetylesterase 36 82 IPR004963 GO:0016787
Stsc30313g00001 105 PANTHER NOTUM-RELATED 10 82 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30313g00001 Stsc-Chr30313 811 1347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30313g00001 34 82 Carbohydrate Esterase AT5G23870 73.469 1.24e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30313g00001 K19882 - mnt:21389932 89.3521