Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30312g00009 ATGGTGAATCAACTTCCAAACCCAGCTCTTGAAAAGTTTGCAAGGCAACTCCATCTCCAATCTCCTCTTTCCTCCGACATCCAAACAAACAATGGATCCTTCGGCCGCCCCGCTCCATACCAAAGGCGCTACTCGAACGCAGCATTATTGCCGGCACGCGGCAACTCCACAACGGACCTATTCAACGTTACAGCCGCTACGAACTCGCCCGTGTTTGTGGCAGCTCCAGCAGAGAAGGGGAACTTCCTGATTGACTTCATGATGGGCGGAGTGTCGGCTGCGGTGTCAAAAACCGCTGCTGCTCCGATCGAACGAGTGAAGCTTTTGATCCAAAATCAGGATGAGATGATGAAACAAGGTAGACTTGCTCAGCCATACAAGGGTATTGGTGACTGCTTTAGTCGAACAATAGCTGATGAGGGTGTGGCTTCTCTTTGGAGAGGTAACACTGCAAATGTCATTCGCTATTTCCCCACTCAGGCTCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAAAGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCGCTCTTGTTTGTGTACTCTCTTGACTACGCTCGTACTCGTCTTGCTAATGACGCCAAGGCTGCCAAGAAGGGTGGCGGCGAGAGGCAGTTCAACGGTCTCATCGACGTCTATAAGAAGACCTTGGCCACCGACGGTATCGCCGGTCTTTACCGCGGTTTCAACATTTCCTGCGTTGGAATTATTGTCTATCGCGGTCTCTACTTTGGAATGTATGATTCTCTGAAGCCAGTTCTCTTGACTGGATCTTTGCAGGATAGCTTTTTCGCTAGCTTTGCTCTGGGATGGCTCATCACTAATGGTGCAGGTCTTGCATCATACCCAATTGACACTGTTAGGAGAAGAATGATGATGACTTCTGGTGCAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTACACAGATCGTCAAGAATGAGGGTTCCAAGTCCTTGTTCAAGGGTGCTGGTGCTAACATCCTCCGTGCCGTCGCCGGTGCCGGTGTCCTTGCTGGCTATGACAAGTTGCAGGTCATCGTGTTTGGCAAGAAGTATGGATCCGGTGGTGCTTAA 1152 0.4965 MVNQLPNPALEKFARQLHLQSPLSSDIQTNNGSFGRPAPYQRRYSNAALLPARGNSTTDLFNVTAATNSPVFVAAPAEKGNFLIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMMKQGRLAQPYKGIGDCFSRTIADEGVASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGERQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGAAVKYKSSMDAFTQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30312g00009 383 Pfam Mitochondrial carrier protein 287 372 IPR018108 -
Stsc30312g00009 383 Pfam Mitochondrial carrier protein 184 281 IPR018108 -
Stsc30312g00009 383 Pfam Mitochondrial carrier protein 81 177 IPR018108 -
Stsc30312g00009 383 Gene3D Mitochondrial carrier domain 83 379 IPR023395 -
Stsc30312g00009 383 SUPERFAMILY Mitochondrial carrier 80 368 IPR023395 -
Stsc30312g00009 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 372 IPR018108 -
Stsc30312g00009 383 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 71 382 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 FunFam ADP,ATP carrier protein, mitochondrial 83 379 - -
Stsc30312g00009 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 173 IPR018108 -
Stsc30312g00009 383 PRINTS Adenine nucleotide translocator signature 126 147 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 PRINTS Adenine nucleotide translocator signature 291 307 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 PRINTS Adenine nucleotide translocator signature 159 171 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 PRINTS Adenine nucleotide translocator signature 185 198 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 PRINTS Adenine nucleotide translocator signature 82 94 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 98 112 IPR002067 GO:0055085
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 251 269 IPR002067 GO:0055085
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 85 98 IPR002067 GO:0055085
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 295 317 IPR002067 GO:0055085
Stsc30312g00009 383 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Stsc30312g00009 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 185 278 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30312g00009 Stsc-Chr30312 75238 77509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30312g00009 1 383 Antiporters AT5G13490 80.357 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30312g00009 K05863 - qsa:O6P43_029531 597.816