Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30312g00004 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCATCCAAGCCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGATTGAGGATCAATGGGTCACTTGCAAGGAGGGCCATAAGAGAGTTGATGGCTAGAGGTTCGATTAGACTTGTCTCCGCCCACGCTAGTCAGCAGATTTACACAAGAGCAACAAACACCTAG 327 0.4832 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30312g00004 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Stsc30312g00004 108 Gene3D - 21 108 - -
Stsc30312g00004 108 FunFam 40S ribosomal protein S25 21 108 - -
Stsc30312g00004 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Stsc30312g00004 108 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30312g00004 Stsc-Chr30312 24279 25939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30312g00004 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 2.55e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30312g00004 K02975 - gmx:100786842 157.532