Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30311g00007 ATGGTTATACATTTAACGACCATAGGAGAGAGTCATCCCACAATAGCCAACCAATTTTCCTACTGCTCTCTCCATATGGGAGTTCTCATTCTCCTCCTCCTCTTCTTCCTCCTCCTTCTTATCCGCTTCTTCTTTCAGTTATGGCGAACAAAGAAGCTCTCACACCTCATTTCCTTCTACAAGAACCGTAACCGCTTACTCGAGTGGTTCACGGAGCTTCTTGCTGAGTCACCAACCAACACTATCGTGGTTCACCGCTTAGGCTCACGTAGAACCATTGTAACAGCCAACCCTTCCAACGTTGAGTACATTCTCAAGAGCAACTTCTTCAACTTCCCAAAAGGCAAGCCTTTCACTCATGTATTGGGTGATTTTCTCGGCAATGGGATTTTCAACGTGGACGGTGACCGTTGGTTTAGTCAACGCAAGGTCGCAAGCCATGAGTTCTCAGCAAGGTCTCTAAGGGAGTTCTTAATGTACACTCTTGCGGAAGAGGTCCACGGGAGGCTCGTCCCTGCGCTAGAGGGAGTTTCGTACGACGGCGTTCTGGACTTGCAAGAGATTCTGGCGAGATTCTCGTTCAACGTGATCTGTAAGTTCGCCATGGGAAGTGGTAATGTGTGTTCTTTGGATCCTTGTGTCCCCGTTTCTTCGCTCTGGAGAGCGTTCGACGTGGCGGCCGCGATATCGGCGAGGCGAGGTGCGGCGCCTTTGTTTGTTATTTGGAAGGTGAAGAGATTGCTTCGGGTTGGATCTGAGCGGAGGCTTAAAGAAGCGGTTCTTGAGGTTCACACGCACGTGATGAATATGATTCATGAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAATAAGATGATGAAAAGTAATAGAGAAGATTTCATGTCAAGGCTTATATGTGGTGGTTATGAAGATGATGTTATTAGGGACATGGTGATAAGTTTTGTGATGGCTGGGAAGGACACAACTTCAGCAGCATTGACATGGTTCTTTTGGATATTGTCACATTATCCAAATGTGGAGGAAAAGATTTTGAAAGAGGCAGAGGCAAATGAGCCGTTAAATTATGAGTCACTTAAGAGGTTGAATTTCCTGAAGGCGTGCCTGTGTGAGTCAATGAGGCTCTTCCCACCAGTGGCATGGGACTCAAAGCATGCCTTGTGTGATGATGTGTTGCCAGATGGCACTGTGGTCAAAGCAGGAGATAGGGTCACTTATTTTCCATATGGAATGGGGAGAATGGAAGAGTTGTGGGGGTTGGATCGGTTTGAGTTCAGGCCAGAGAGATGGTACATTGGAGGAAAGTGGAGTGAGGTTTCTCCGTTCAAGTTTCCAATATTTCAGGCTGGTCCAAGGGTGTGTTTAGGCAAGGAAATGGCTTTTGTTCAAATGAAATATGTAGTTGTTGAAATTCTCAAGAGGTTTAGGATCAGACCAGTTAGCACAAACAAGCCTACGTTTGTGCCACTTCTCACTGCACACATGGCCGGCGGCTTAAAGATATTGATTTCAAATAGGGAGAATTAA 1524 0.46 MVIHLTTIGESHPTIANQFSYCSLHMGVLILLLLFFLLLLIRFFFQLWRTKKLSHLISFYKNRNRLLEWFTELLAESPTNTIVVHRLGSRRTIVTANPSNVEYILKSNFFNFPKGKPFTHVLGDFLGNGIFNVDGDRWFSQRKVASHEFSARSLREFLMYTLAEEVHGRLVPALEGVSYDGVLDLQEILARFSFNVICKFAMGSGNVCSLDPCVPVSSLWRAFDVAAAISARRGAAPLFVIWKVKRLLRVGSERRLKEAVLEVHTHVMNMIHEKKKKKKKKKNKMMKSNREDFMSRLICGGYEDDVIRDMVISFVMAGKDTTSAALTWFFWILSHYPNVEEKILKEAEANEPLNYESLKRLNFLKACLCESMRLFPPVAWDSKHALCDDVLPDGTVVKAGDRVTYFPYGMGRMEELWGLDRFEFRPERWYIGGKWSEVSPFKFPIFQAGPRVCLGKEMAFVQMKYVVVEILKRFRIRPVSTNKPTFVPLLTAHMAGGLKILISNREN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30311g00007 507 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 CDD CYP86A 81 498 - -
Stsc30311g00007 507 Gene3D Cytochrome P450 45 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 SUPERFAMILY Cytochrome P450 53 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 Coils Coil 271 291 - -
Stsc30311g00007 507 PANTHER CYTOCHROME P450 41 499 - -
Stsc30311g00007 507 Pfam Cytochrome P450 80 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30311g00007 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30311g00007 Stsc-Chr30311 78407 80028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30311g00007 56 506 Cytochrome P450 AT3G01900 56.371 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30311g00007 K20665 - gmx:100786130 622.083