Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30310g00014 ATGTTAACATGCTATCTTTGTGGACTTGTGCTTCATGAAGGTGTTGAGGGTTGCACTATTGCTGGAAAGAAGAATGACAAGGCAGTTAAGGAAGATCTTCTGAAGGATGAGATTGTTTCTGAACATCTAACTAGGAACATTCAGTTTTTTGGCTTTGAGTCTCAGCAGAAAGTGAGTGCATCATATGTTGTAGTAATTGGTCTTGGAGGGGTTGGAAGTCATGCTGCATCTATGCTCTTGAGATCAGGGGTTGGCAAGCTTCTTCTTGTGGACTTTGACCAGGTTTCTCTTTCATCATTAAATCGACACGCTGTTGCAACAAGAGCAGATGTTGGCATCCCAAAAGCGCAGTGCCTTAAGGAGCATTTCTTATCTATCTTTCCTGAGTGCCAAGTAGATGCAAAAGTAATGTTATATGATTCATCTACCGAAGAAGAAATTTTGTCAGGCCACCCTGACTTTGTCTTGGATTGTATTGATAACATTGATACCAAGGTGGCACTTCTTGCTGCTTGTGTACGGAGGGGCTTGAAGGTGTTATCAGCTACTGGGGCTGGTGCTAGAGCTGATCCAACTAGAATACGGATTGCTGATTTAAGAGAGTCAACTAATGATCCATTGTCTCGAGCAGTGAGACACCGATTGAGGAAAGATCAGGGCATTGAAGGTGGCATCCCTGTTGTATTTTCTTTAGAAAAACCCAAAGTTAAGTTGCTTCCATTTAAGGGTCCAAGTGGTGAAGAGGAAAATCCTTCAGACTACCAGATAGTACCAGGCTTCAGGGTCCGTATCATACCCGTGTTAGGCACAATCCCTGCAATATTTGGACAAGTCATGGCATCCTATGTTGTGACAGAATTAGCTGGATTTCAAGTTCAAACAGAACCAATAGTTAATTTTGACACAGATCATTACCATACTCTTCATCAACGCCTTATTGAGCATGAGGAGTTAGTATATGGAACATCACAGCAAGTGCAGGTAGATGTTGAAGAAGTGATGTATGTTGTAAAAGAATTATGGCATGGAAGAAGTGCTAGAGACCAGATTGTGAAAGAAGTTGGACGAGGAATGTGGCGATCAGTTAATGAATTAATGCTTGTAAGGTGGGACTGCGAAAAGCCGGCTTCTATATCAAATTTAATTCTTTTGAAATTCAAAGAGGCTGATGAGCATGAGTGTAGGACATTGGAAGATATAAAGGAAAAGGAACCTGAGTTCTACAACAGAGTAAATGCAGTGTTAAGAAGAGCTGAAATTGACTTTGGCTATGCACATTAG 1281 0.413 MLTCYLCGLVLHEGVEGCTIAGKKNDKAVKEDLLKDEIVSEHLTRNIQFFGFESQQKVSASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECQVDAKVMLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRAVRHRLRKDQGIEGGIPVVFSLEKPKVKLLPFKGPSGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTELAGFQVQTEPIVNFDTDHYHTLHQRLIEHEELVYGTSQQVQVDVEEVMYVVKELWHGRSARDQIVKEVGRGMWRSVNELMLVRWDCEKPASISNLILLKFKEADEHECRTLEDIKEKEPEFYNRVNAVLRRAEIDFGYAH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30310g00014 426 Gene3D - 34 300 - -
Stsc30310g00014 426 Pfam ThiF family 44 306 IPR000594 -
Stsc30310g00014 426 CDD YgdL_like 50 284 - -
Stsc30310g00014 426 FunFam tRNA threonylcarbamoyladenosine dehydratase 2-like 35 294 - -
Stsc30310g00014 426 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 24 421 IPR045886 -
Stsc30310g00014 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 43 301 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30310g00014 Stsc-Chr30310 97627 102330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30310g00014 84 186 Sulfurtransferasese or Rhodanese AT5G55130 30.097 5.43e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30310g00014 K22132 - gmx:100815445 734.947