Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30309g00005 ATGGAACTTAAGATGGCTGCTAACATGAGTACCATAAAAATCTCTTCTGATGGAGCGTGGCAGGGTGATAACCCTCTCAACTACGCTTTTCCATTGTTGATCATTCAAACCGTCTTAGTCCTCTTCGTTAGCCGTACCTTAACCTTCCTTCTCAAACCTCTTCGTCAACCCAAAGTTGTTGCTGAAATTCTTGGTGGAATATTGCTAGGACCTTCTGCAATTGGACGTAACAAACATTTTATGAAGCTGGTGTTCCCATCATGGAGCACTCCAATACTTGAATCGGTGGCCAGCATTGGCCTCCTTTTCTTCCTCTTTCTTGTCGGAATTGAGCTTGATATTCGAACAATTCGCCGCAGTGGCAAGAAAGCTTTTAGCATTGCCGTTGCCGGAATATCCCTCCCCTTCCTATTCGCCATGGGAGTAACATTCCTCCTCCAGAAAGCAATTAACTTTGGAGCCGCCCACAACTACCTGCAGCACCTCATGTTCATGGGAGTCTCCCTCTCCATCACAGCTTTTCCTGTGCTCGCACGCATCTTAGCGGAGCTCAAGCTCCTCACCACACAAGTAGGAGAAACCGCCATGGCTGCTGCCGCTTTCAATGATATTGCCGCCTGGGTTCTCTTGGCCTTGGCTGTCGCCTTGGCCGGTGGACAACACAAAACCTCCCCACTCACATCCATTTGGGTTCTCATCTCAGGGGTGGTGTTTGTTGCTTTCATGTTGGTGGTTGTGAGACCATTCATGAACTGGGTAGCACGCCAGTGGTCACGCCAACACCAAGTCATTGACGAAGTTTACGTATCATTAACCCTTGCAGGGGTTATGATCGCAGGCTTCGTCACTGACTTCATAGGAATACACTCAATCTTCGGAGCCTTCGTTTTCGGGATCACGATCCCGAAGAAGGGCGAGTTTGCAAGCAGCGTCACAAAGAGAATCGAGGACTTTGTGACTGCTCTGTTGCTCCCGTTGTACTTTGCCTCCAGCGGGTTGAAAACCGACGTGGCCAAGTTGCATGGGATGGAAGAGTGGGGGCTTCTGGTGCTGGTTATAGCGACGGCATGCGTCGGGAAGATCCTGGGAACATTTACGGTGGCCATGATGAGCATGATACCCGTGAGGGAATCTCTTACTCTTGGATTCTTGATGAACACCAAGGGTTTGGTGGAGCTTATTGTTCTCAACATCGGCAAAGAGAAAAAGGTACTTAACGATGAAGTGTTTGCGATTCTTGTGCTAATGGCTCTGTTCACCACCTTCATTACAACGCCAATAGTCTTAGCCATATACCGCCCTTCGCGATTCAGTGCTACACATCACCAACCAAAACACCCAACACACAGACCACTCGCACTCTCATCATCGCAACATGACCTCACCATCCTTGCATGCGTCCACGACCACCACACCTCCAACATTCCCTCTCTAATTACTTTCATTGAATCCATTCGACCAAATTACATCACCACCTCCACCAATCTCAATTTCTACGTTATGAAACTCGTCGAGCTCACCGATCGCTCCACCTCCATCCTGACCGTTCAACGCCACCGCAGGAATGGCTTCCCCATCGTCAAGAGAAGGTCACAAAGCTCCATGCACGACCAAGTTGCGGCTGCCTTCCAAGTTTACAACGGTGTGGGCCAAGTGAGATTGCATCATTTGACGTCGGTGTCGGCGCTGTCGACGATGCACGAGGACATATGCCATGTTGCGGAGAAGCAGGGAGTGGGAATGATCATAATTCCATTCCATAAAAGGTGGAGGAGAGGGGAAGAAGATGAAGATGATCATGAAGAAATTGAGATAGGTCAAGGGTGGAGGGGGGTGAACCAAAGGGTGCTTCAAACTGCACCATGCGCCGTGGCGGTGCTCGTGGACCGTGGGGTTGGTACATGGCTTCAACCAGGTGCAAGTGATGCAACCATGAGGGTTTGCATAGTTTTCATTGGTGGAATGCATGACCGTATGGCTTTAGATTTGGGTGCAAGGATGGCACAACATCCAGCAATAACGTTGTCTCTCGTGAGGTTCATGTCAACAGAGGATAGACCATTGGATTGGGAAACAGACAAGGAGCTAGACGAGGTGGCAGTAAATGAGTTGAGAGCAAAATTTGAGGAGTCAGTGAAGTACATTGAGAAGGATGCAAGCAACATAACAGAGGAGGTGTTGAGAATGGGAAAATCTAAGGAGTATGAGTTACTGATTGTGGGAAAAGGAAATCAGCTTCCGGAGTCATCAATGGAAGATTCTCGACTCGAGTATCCTGAGCTGGGGCGCATTGGAAATCTCTTAACCTCCTCAGCACTGGGTATTACAAGCTCTGTGCTGGTCATACAAGACCAGCAATTGGCAACTTCCAATGAAACCGAACTCAGGAAGATGGCTAGTGTCTTGTGA 2409 0.489 MELKMAANMSTIKISSDGAWQGDNPLNYAFPLLIIQTVLVLFVSRTLTFLLKPLRQPKVVAEILGGILLGPSAIGRNKHFMKLVFPSWSTPILESVASIGLLFFLFLVGIELDIRTIRRSGKKAFSIAVAGISLPFLFAMGVTFLLQKAINFGAAHNYLQHLMFMGVSLSITAFPVLARILAELKLLTTQVGETAMAAAAFNDIAAWVLLALAVALAGGQHKTSPLTSIWVLISGVVFVAFMLVVVRPFMNWVARQWSRQHQVIDEVYVSLTLAGVMIAGFVTDFIGIHSIFGAFVFGITIPKKGEFASSVTKRIEDFVTALLLPLYFASSGLKTDVAKLHGMEEWGLLVLVIATACVGKILGTFTVAMMSMIPVRESLTLGFLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPIVLAIYRPSRFSATHHQPKHPTHRPLALSSSQHDLTILACVHDHHTSNIPSLITFIESIRPNYITTSTNLNFYVMKLVELTDRSTSILTVQRHRRNGFPIVKRRSQSSMHDQVAAAFQVYNGVGQVRLHHLTSVSALSTMHEDICHVAEKQGVGMIIIPFHKRWRRGEEDEDDHEEIEIGQGWRGVNQRVLQTAPCAVAVLVDRGVGTWLQPGASDATMRVCIVFIGGMHDRMALDLGARMAQHPAITLSLVRFMSTEDRPLDWETDKELDEVAVNELRAKFEESVKYIEKDASNITEEVLRMGKSKEYELLIVGKGNQLPESSMEDSRLEYPELGRIGNLLTSSALGITSSVLVIQDQQLATSNETELRKMASVL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30309g00005 802 Gene3D - 498 771 - -
Stsc30309g00005 802 FunFam Cation/H(+) antiporter 15 32 439 - -
Stsc30309g00005 802 PANTHER CATION/H + ANTIPORTER 9 786 - -
Stsc30309g00005 802 Pfam Sodium/hydrogen exchanger family 38 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc30309g00005 802 Gene3D - 32 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30309g00005 Stsc-Chr30309 28184 34304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30309g00005 80 800 Antiporter Super Family AT3G53720 54.439 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30309g00005 K26731 - gmx:100799165 952.97