Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30309g00004 ATGGCCCCAAACATAACCTCCATAAAAACATCCTCCAGTGGAGCATGGCAAGGGGACAACCCCTTAGACTTCGCCTTCCCCCTCCTTATAGTCCAAACCACTTTGATCCTTATCGTCACCCGCATCCTTGCTTTCTTCTTCAAACCCCTCCGCCAGCCCAAAGTCATTGCTGAGATTGTCGGCGGGATTGTGCTGGGACCATCGGCATTGGGGAGGAGCAAAGCCTACATGAACAGGCTGTTCCCATCATGGAGCACTCCAATACTCGAATCAGTTGCCAGCATTGGCCTCTTGTTCTTCCTCTTCCTTGTTGGCCTCGAGCTCGACCTCAACTCAATCCGCCGCAGTGGCCGCCGTGCATTCAGCATCGCCGCCGCCGGAATCTCCCTTCCCTTCATCAGCGGGATTGGCGTCGCCTTCATCCTCCGAAAGACCATTGATGGAGCCGACAAGGTCGGTTACGGCCAGTTCCTCGTCTTCATGGGCGTCGCTCTCTCCATAACCGCCTTTCCCGTCCTCGCTCGAATCCTCGCAGAGCTCAAGCTCCTCACCACGCCTGTCGGCGAGACCGCCATGGCAGCCGCCGCCTTCAACGACGTCGCCGCCTGGATACTCCTCGCACTCGCCGTAGCACTCGCCGGAAACGCCGACGGCAGCCACAAGAGCCCTCTGGTGTCGGTGTGGGTTCTCCTGTCTGGCGCGGCGTTCGTGATCTTCATGATGACGGTTATCCGACCGGCGATGAAGCTGGTGGCGCGACGGTGCTCGGCGGAGCACGATGCGGTGGACGAAGCGTACATCTGCTTAACACTGGCGGGCGTGATGGTATCGGGATTCTTGACGGACCTGATCGGGATCCACTCGATCTTCGGCGCGTTCGTGTTCGGATTGACGATTCCGAAGGGAGGGGATTTCGCGGAGAGGCTGATTGAGAGGATCGAGGATTTCGTTTCAGGGTTGCTGCTGCCGCTGTACTTCGCTTCGAGTGGGTTGAAGACTGACGTGACAAAGATACGTGGCGGGACGGCGTGGGGGCTGTTAGTGCTGGTGATATCCACGGCGTGCGCCGGGAAGATTCTTGGGACGTTCGTGGCGGCGTTGATGTGCATGATTCCGGCGAGAGAGGCGGTGACACTTGGCGTTCTCATGAACACCAAGGGACTCGTGGAGCTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTCTAAACGACGAGATATTTGCAATCTTGGTGCTGATGGCATTGTTCACAACCTTCATAACAACCCCAATGGTGATGGCCATTTACAAACCAGCACGTGGCATCACCATGAAGACCCACCGCAACCTCGGGGACCTAACCTTAAACTCCGGCAGCAAACACGTCAAAGATGAGCTCCGAGTCCTAGCTTGCGTCCATGGCCCCGGCAATGTCCCTTCCATCATAAGCCTCATTGAGTCAACTCGCAGCACCAAAAATTCCTTCGTCAAACTCTTCATCATGCACCTAGTCGAGCTCACAGAGCGATCCTCCTCCATTGTCATGGTCCAGCGTGTTCGAAAGAACGGCTTCCCGTTCTTTAAGCGGTCGTCCCACCGCGAGTGGCGCGACCGCTTGGCTGGAGCCTTCCAGGCCTACAGCCAATTGGGCCGAGTTTCGGTTCGGCCCACTACTGCCATCTCTTCTTTGTCCACAATGCACCAGGATATATGCCACGTGGCAGAGGAAAAGAGAGTGACCATGATCATCCTGCCGTTCCACAAGCAGTGGAGAGTGGAAGGTGATGAGGAGGACAATGGTGGGGTCCACGAAGTGTTGGAAAACGTGGGCCATGGATGGAGAGGTGTGAACCAGAAGGTGCTGAAGCACGCGCCTTGTTCTGTGGCTGTGTTAGTGGACCGGGGTTTTGGAAGTGGGTCGCAGACTCCAGGCCCAAATAGCTCGATGGCCCAACGGGTTTGTATTTTATTCTTTGGTGGGCCGGATGATCGAGAGGCCTTGGAGTTGGGTGGGAGAATGGCTGAGCACCCTATTGTTAGGGTCACTATTATTAGGTTCGTTGAGCAAGATGAATCCAACGGTAGAAACATTGTGTTACACCCCTCGCCAAATGCTAATACCGACCAAAGTTATAGCTTCTCAACGGCTAAGATGAACCGTGAAATTGAGAAGGAGTTGGATGACAAGGCAATGGAAGAGTTTAGAGGGAAGTGGGGAGGGATGGTTGGGTATGTTGAGAAAGAGAGTGAGAATGTTGTGGAGGAGGCACTAAGTATAGGGAAAAGTGGAGATTATGATCTTATAGTAGTTGGGAAGGGTAGGTTTCCGTCGAGTATGGTGGCGAACTTAGCGGAGAGGCAGGCGGAGCACGCGGAGTTGGGTCCCATAGGGGATGTTCTAGCATGTTCAGGGCAGGGAGTGGTGTCATCAGTGTTGGTAATTCAACAACATGATGTAGCTTTGACGGATGAGGCACCGGCATTGAGGGTGTTACATGGTGGCTATGACAATGCTAGAGTAGTGGATAATGATTCATCAGCCAGTGGTGGAAATAAAGAAATTTCATCAGCTGACAACAATGATATAGTATGA 2574 0.54 MAPNITSIKTSSSGAWQGDNPLDFAFPLLIVQTTLILIVTRILAFFFKPLRQPKVIAEIVGGIVLGPSALGRSKAYMNRLFPSWSTPILESVASIGLLFFLFLVGLELDLNSIRRSGRRAFSIAAAGISLPFISGIGVAFILRKTIDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTPVGETAMAAAAFNDVAAWILLALAVALAGNADGSHKSPLVSVWVLLSGAAFVIFMMTVIRPAMKLVARRCSAEHDAVDEAYICLTLAGVMVSGFLTDLIGIHSIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTDVTKIRGGTAWGLLVLVISTACAGKILGTFVAALMCMIPAREAVTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPMVMAIYKPARGITMKTHRNLGDLTLNSGSKHVKDELRVLACVHGPGNVPSIISLIESTRSTKNSFVKLFIMHLVELTERSSSIVMVQRVRKNGFPFFKRSSHREWRDRLAGAFQAYSQLGRVSVRPTTAISSLSTMHQDICHVAEEKRVTMIILPFHKQWRVEGDEEDNGGVHEVLENVGHGWRGVNQKVLKHAPCSVAVLVDRGFGSGSQTPGPNSSMAQRVCILFFGGPDDREALELGGRMAEHPIVRVTIIRFVEQDESNGRNIVLHPSPNANTDQSYSFSTAKMNREIEKELDDKAMEEFRGKWGGMVGYVEKESENVVEEALSIGKSGDYDLIVVGKGRFPSSMVANLAERQAEHAELGPIGDVLACSGQGVVSSVLVIQQHDVALTDEAPALRVLHGGYDNARVVDNDSSASGGNKEISSADNNDIV 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30309g00004 857 MobiDBLite consensus disorder prediction 836 857 - -
Stsc30309g00004 857 Gene3D - 486 788 - -
Stsc30309g00004 857 Pfam Sodium/hydrogen exchanger family 36 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc30309g00004 857 FunFam Cation/H(+) antiporter 15 28 437 - -
Stsc30309g00004 857 Gene3D - 28 435 IPR038770 -
Stsc30309g00004 857 PANTHER CATION/H + ANTIPORTER 9 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30309g00004 Stsc-Chr30309 12566 19621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30309g00004 75 818 Antiporter Super Family AT3G53720 69.098 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30309g00004 K26731 - zju:107431117 1237.63