Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30308g00006 ATGGGTCATGGAGAAAAGATCAGTCCAAGGAGCTTCCATTTGCATCGCCACCTTCTCCAACATCATCATCAACATGGTGAGAAGAACAACAACAACAACAACAACAAAGAGTTTAAGGATGTTATACCAAAAGGTTTCATGGCAATTAAGGTAGGTCAAGGTGAAGAACAACAAAGGTTTGTTGTGCCTGTTATATACTTCAACCACCCTCTCTTCATGCAACTATTGAAGGAAGCTGAAGAAGAGTATGGTTTTGATCAGAAAGGAACCATCACTATACCTTGCCATGTTGAAGAGTTCAGGAACATTAGGGGCTTGATTGATAGGGAAAAGAGTTTCCATCATCATCATCATCACCATCACCATGTTGGTTGCTTTGGTTTTTAA 387 0.4005 MGHGEKISPRSFHLHRHLLQHHHQHGEKNNNNNNNKEFKDVIPKGFMAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNIRGLIDREKSFHHHHHHHHHVGCFGF 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30308g00006 128 Pfam Auxin responsive protein 29 103 IPR003676 GO:0009733
Stsc30308g00006 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30308g00006 Stsc-Chr30308 95275 95661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30308g00006 3 108 Calmodulin-binding Proteins AT3G43120 37.736 6.18e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30308g00006 K14488 - gmx:100796789 147.517