Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30308g00006 | ATGGGTCATGGAGAAAAGATCAGTCCAAGGAGCTTCCATTTGCATCGCCACCTTCTCCAACATCATCATCAACATGGTGAGAAGAACAACAACAACAACAACAACAAAGAGTTTAAGGATGTTATACCAAAAGGTTTCATGGCAATTAAGGTAGGTCAAGGTGAAGAACAACAAAGGTTTGTTGTGCCTGTTATATACTTCAACCACCCTCTCTTCATGCAACTATTGAAGGAAGCTGAAGAAGAGTATGGTTTTGATCAGAAAGGAACCATCACTATACCTTGCCATGTTGAAGAGTTCAGGAACATTAGGGGCTTGATTGATAGGGAAAAGAGTTTCCATCATCATCATCATCACCATCACCATGTTGGTTGCTTTGGTTTTTAA | 387 | 0.4005 | MGHGEKISPRSFHLHRHLLQHHHQHGEKNNNNNNNKEFKDVIPKGFMAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNIRGLIDREKSFHHHHHHHHHVGCFGF | 128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30308g00006 | 128 | Pfam | Auxin responsive protein | 29 | 103 | IPR003676 | GO:0009733 | |
Stsc30308g00006 | 128 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 30 | 102 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30308g00006 | Stsc-Chr30308 | 95275 | 95661 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30308g00006 | 3 | 108 | Calmodulin-binding Proteins | AT3G43120 | 37.736 | 6.18e-18 | 73.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30308g00006 | K14488 | - | gmx:100796789 | 147.517 |