Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30302g00030 ATGGCCATGGCTTCCACATCTCTAATTATCAGATACCCTCTTCCAAAACCAAACCTCTCTTCCATCAAACTCAAACGCCTTCAAACCACAACGCCACTCCCTTTCCCTTCAATCAAACTCAAACCTTTCCAACTCACAACAAAACTTATTAACAAACCCTTTGCTGCCACTGCATCATCTCCCTCCATAGACCCCACCACCACCACAACACTCCCTCCACAACCATGGCAAGGCGCGAAGCTGAAGCCACTAATGGCTTCCATCGCAACAGGGCTCATCCTCTGGCTCCTCCCTTCACCTTCCGGAGTACCCAGAAACGCGTGGCAGCTTCTCTCCATTTTCATGGCCGCTATTGTCGGCATCATCACACAGCCACTCCCTCTGGGAGCTGTTGCCATCATGGGTCTATGCGCTGCCGTGCTCACAAAAACGCTAACATACGCCGCAGCGTTCTCGGCCTTTGGCGACCAGATACCATGGCTGGTGGCTCTGGCTTTCTTCTTCGCCAAAGGGTTCATCAAAACAGGGCTAGGAACGAGAATCGCATACCATATCGTCTCAGTCGCCGGAAACTCCTCCCTTGGATTAGGATACAGCTTGGTGTTGAGCGAGGCATTGCTTGCACCAGCCATACCTTCAGTTTCAGCAAGAGCAGGTGGGATCATACTCCCATTAGTGAAGTCTCTGAGCGAAGCATGTGGAAGCAACGTTGGTGATGGAACAGAAAGCAGGCTAGGCTCATGGCTCACTCTCACGTGCTTCCAAACCTCCGTGATATCCTCTGCCATGTTCCTGACTGCCATGGCCGCAAACCCTCTGTGTGCGACGCTGGCGCGTGGGGCCGTAGGGAGGGGGATTGGATGGACGGAGTGGGCGGTGGCGGCGGGTGTGCCGGGCGTGGTTTCATTGGTTGTTGTGCCGTTGATCTTGTATGTGATATACCCGCCGGGAGTGAAGAGTAGTCCTGATGCTCCAAGAGTTGCAAGGGACAAGTTGAAACTTATGGGACCTATGACTCCCAACGAAAAAATCATGGCTGCTACTCTCTTCCTTACGGTGGGACTTTGGGTTTTTGGAGGGGTTCTTGGTGTTGATGCTGTCACTGCTGCTATTCTTGGATTATCTGTACTCCTTGTCACTGGGGTCGTAACATGGAAGGAGTGCCTGGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCTATGGCTGGATATTTGAACAAGTATGGTCTAATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCTTGGCAACTATCTTTTGGAATCCTTGTTCTACTCTACTTCTACTCGCACTACTTCTTTGCAAGTGGAGCAGCTCATATAGGTGCCATGTTCACTGCTTTCTTGTCTGTCGCCACTGCTCTGGGAACTCCACCATTCTTTGGAGCCATGGTGCTTTCCTTCCTCTCCAACCTCATGGGCGGCCTTACTCATTATGGGATTGGATCAGCCCCTGTATTTTACGGCGCCAACTATGTTCCGCTCGCTAAATGGTGGGGCTATGGATTCCTCATCAGTATTGTTAACATTGTAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1641 0.5107 MAMASTSLIIRYPLPKPNLSSIKLKRLQTTTPLPFPSIKLKPFQLTTKLINKPFAATASSPSIDPTTTTTLPPQPWQGAKLKPLMASIATGLILWLLPSPSGVPRNAWQLLSIFMAAIVGIITQPLPLGAVAIMGLCAAVLTKTLTYAAAFSAFGDQIPWLVALAFFFAKGFIKTGLGTRIAYHIVSVAGNSSLGLGYSLVLSEALLAPAIPSVSARAGGIILPLVKSLSEACGSNVGDGTESRLGSWLTLTCFQTSVISSAMFLTAMAANPLCATLARGAVGRGIGWTEWAVAAGVPGVVSLVVVPLILYVIYPPGVKSSPDAPRVARDKLKLMGPMTPNEKIMAATLFLTVGLWVFGGVLGVDAVTAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKAIGLW 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30302g00030 546 NCBIfam DASS family sodium-coupled anion symporter 98 540 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30302g00030 546 CDD ArsB_NhaD_permease 118 540 - -
Stsc30302g00030 546 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 58 546 IPR030676 -
Stsc30302g00030 546 Pfam Sodium:sulfate symporter transmembrane region 80 546 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30302g00030 546 PIRSF DASS 70 546 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30302g00030 Stsc-Chr30302 110313 115773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30302g00030 14 545 Antiporters AT5G12860 76.155 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30302g00030 - - aew:130792131 791.956