Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30302g00023 ATGGATCACAATAATAACAATCAGGAGAAAATGCATGGTGGCATGGCGGGACATAGAACGATGATGAAGCGCCACAATAATTTCATGCACATGACATTCTTCTGGGGAACAAAGTCCGAGGTTCTATTCGCCCAATGGCCAGGAGACAGCCGTGTGATGTACGCACTCGCTCTGCTTCTTGTGTTCGTCATGTCCTTCCTCGTTGAGTGGCTCTCCCACACGCGTTTCGTCAAACCCGGTTCAAAAAACATTGTTGCCGGTCTGGTTCAGACGATCTTGCACCTCCTTAGAGTTGGTCTGGCTTACCTCGTTATGCTGGCGCTCATGTCCTTTAATGGTGGTGTGTTCTTGGTGGCTCTCTTCGCTCACGCTCTTGGCTTCTTCTTGTTCCGTAGCAGGGCTTTTGTTAAAACGCCGCAAAATCATTATAATAAGGACCTTGATCCTCCAATTTGTTGTTAA 462 0.4762 MDHNNNNQEKMHGGMAGHRTMMKRHNNFMHMTFFWGTKSEVLFAQWPGDSRVMYALALLLVFVMSFLVEWLSHTRFVKPGSKNIVAGLVQTILHLLRVGLAYLVMLALMSFNGGVFLVALFAHALGFFLFRSRAFVKTPQNHYNKDLDPPICC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30302g00023 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 21 142 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc30302g00023 153 Pfam Ctr copper transporter family 31 76 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc30302g00023 153 Pfam Ctr copper transporter family 83 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30302g00023 Stsc-Chr30302 76141 76602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30302g00023 32 152 Inorganic Solute Cotransporters AT5G59030 52.419 5.06e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30302g00023 K14686 - rcu:8279809 170.244