Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30300g00019 ATGTCTCTGTATAATAGCAATAGTCTTGTTGTTGCTGTTGATCCATCTGGCCATGCTAACTTTTCTACAATCCAATCTGCAATTGATTCAGTCCCTTCCAACAATAAGCATTGGATTTCAATCAATGTCAAAGCTGGTACTTACAGGGAAAAGTTGAAGATTCCAGATGATAAGCCATTCATAATACTGAAAGGAGAAGGAAAAAGGAACACTGTTGTTGATTGGGATGATCATGCTGCAACCTCACAGAGCCCTACCTTCTCAACAATGGCTGACAATATTGTTGTTAAATCCATCAGTTTTAGGAATTCATACAATAATCCAAGAAACAGTAATCCGATTACACCTGCAGTGGCTGCAATGGTTAGCGGTGACAAGTCAACCTTTTACAATGTTGGATTCTTTGGTCTTCAAGACACTTTGTGGGATGATCAAGGAAGACATTACTACAAGTTTTGTACCATTCAAGGTGCTGTTGATTTTATCTTTGGTGCTGGCCAGTCCTTATATGAGGGATGTAGCATATCTGTTATTGGAGCTTCCTTAGGTCATGGTAATGTGGGTTTTATCACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTCAAAAATTGCAGAGTGTTTGGAAATGGAGCAACATTCTTGGGAAGGCCATGGAGAGGTTATGCTAGAGTTCTTTTCTATAACACAAGCATGTCTAACATTATTCTACCAACTGGTTGGGATCCATGGAGTTTCGCTCCTCATAAGGAGCGCATAACTTTTGCGGAGTATGAGAATTTCGGACCGGGTTCTAACATTTCGTTGCGAGTGAAGTGGACTAAGAAGCTTAGTTTAGCAACAATTAATTCAATGACCAGCACTAATTTCATTGACACTGAAGGTTGGCTTAAGGCACAACAACACTTCTAA 924 0.3972 MSLYNSNSLVVAVDPSGHANFSTIQSAIDSVPSNNKHWISINVKAGTYREKLKIPDDKPFIILKGEGKRNTVVDWDDHAATSQSPTFSTMADNIVVKSISFRNSYNNPRNSNPITPAVAAMVSGDKSTFYNVGFFGLQDTLWDDQGRHYYKFCTIQGAVDFIFGAGQSLYEGCSISVIGASLGHGNVGFITAQGRTNPNDANGFVFKNCRVFGNGATFLGRPWRGYARVLFYNTSMSNIILPTGWDPWSFAPHKERITFAEYENFGPGSNISLRVKWTKKLSLATINSMTSTNFIDTEGWLKAQQHF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30300g00019 307 Pfam Pectinesterase 10 297 IPR000070 GO:0030599|GO:0042545
Stsc30300g00019 307 Gene3D - 6 306 IPR012334 -
Stsc30300g00019 307 SUPERFAMILY Pectin lyase-like 9 303 IPR011050 -
Stsc30300g00019 307 FunFam Pectinesterase 5 305 - -
Stsc30300g00019 307 ProSitePatterns Pectinesterase signature 2. 155 164 IPR033131 -
Stsc30300g00019 307 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30300g00019 Stsc-Chr30300 80005 83101 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30300g00019 11 248 Carbohydrate Esterase AT2G19150 47.280 9.48e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30300g00019 - - aprc:113870328 454.907